RNA id: AMCG00011373



Basic Information


Item Value
RNA id AMCG00011373
length 396
RNA type mRNA
GC content 0.61
exon number 2
gene id AMCG00011373
representative True

Chromosome Information


Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 20738382 ~ 20739024 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGAATCGGGGCATCGTGTTTTTCCTGAGGTCTGGGGCGCTGGTGAATGATGTGGTGGAGGAGGGGGTCACGGTGAAGGGAACTTTCCTGCCTGCGCTCCCTCTGGTGGTTATTTCCAATGTGCCCTCCTCCCTGAGCAACAAGCTACTGGCAGCAGAGCGGAGTCATTATGGCCGGCTCACCTGCACCATTAGGAGGGTGCCGCCGGGCTGCAGCGCCCCGGAGCTGAAACACATTCTCTCCTACCGCAGACAGGTTTCATGGTGCCTCAGGGAGAGGTTCCAGCAGGGGGGGCAAGAGGAAGGTGAGGAACAGGCTCTGCCTGCCAGGGGAGGGATTAGGGGGAGGCGATGGCGAGTGCTGCTGGCCTCAGTGGGGATGGGGAAGGGGAGCTAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU132984 lncRNA upstream 122741 20615438 ~ 20615641 (+) True G106277
TU132784 lncRNA upstream 575416 20115971 ~ 20162966 (+) False G106139
TU132783 lncRNA upstream 724034 19978247 ~ 20014348 (+) True G106138
TU132775 lncRNA upstream 742395 19957005 ~ 19995987 (+) True G106134
TU132777 lncRNA upstream 742395 19987204 ~ 19995987 (+) False G106134
TU133009 lncRNA downstream 168426 20907450 ~ 20907653 (+) True G106298
TU133024 lncRNA downstream 213198 20952222 ~ 20952712 (+) True G106310
TU133048 lncRNA downstream 281186 21020210 ~ 21022119 (+) True G106327
TU133072 lncRNA downstream 289769 21028793 ~ 21033188 (+) True G106347
TU133087 lncRNA downstream 392674 21131698 ~ 21132430 (+) True G106361
AMCG00011365 mRNA upstream 399057 20323050 ~ 20339325 (+) True AMCG00011365
AMCG00011364 mRNA upstream 742412 19987249 ~ 19995970 (+) True AMCG00011364
AMCG00011363 mRNA upstream 780748 19956472 ~ 19957634 (+) True AMCG00011363
AMCG00011361 mRNA upstream 783295 19954620 ~ 19955087 (+) True AMCG00011361
AMCG00011359 mRNA upstream 819193 19914612 ~ 19919189 (+) True AMCG00011359
AMCG00011374 mRNA downstream 215770 20954794 ~ 20958447 (+) True AMCG00011374
AMCG00011380 mRNA downstream 388086 21127110 ~ 21131535 (+) True AMCG00011380
AMCG00011381 mRNA downstream 488186 21227210 ~ 21236755 (+) True AMCG00011381
AMCG00011387 mRNA downstream 580400 21319424 ~ 21385863 (+) True AMCG00011387
AMCG00011388 mRNA downstream 1053504 21792528 ~ 21797963 (+) True AMCG00011388
TU132939 other upstream 371159 20361208 ~ 20367223 (+) True G106242
TU132823 other upstream 399295 20296011 ~ 20339087 (+) False AMCG00011365
TU132810 other upstream 575416 20095229 ~ 20162966 (+) False G106139
TU132789 other upstream 575416 20112080 ~ 20162966 (+) True G106139
TU132801 other upstream 575416 20118575 ~ 20162966 (+) False G106139
TU133378 other downstream 2602284 23341308 ~ 23341765 (+) True G106613
TU133383 other downstream 2617038 23356062 ~ 23356559 (+) True G106618
TU133489 other downstream 3009650 23748674 ~ 23753002 (+) True G106711
TU133992 other downstream 5617143 26356167 ~ 26360775 (+) True AMCG00011476
TU134100 other downstream 6031414 26770438 ~ 26771214 (+) True G107202

Expression Profile