RNA id: AMCG00011390



Basic Information


Item Value
RNA id AMCG00011390
length 255
RNA type mRNA
GC content 0.56
exon number 3
gene id AMCG00011390
representative True

Chromosome Information


Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 21868788 ~ 21876333 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGTTACGGTTGCCACATCGACGAGTGACCTTCTCTACAGCCAATCAAGCGCAAGACCTGCAGGACCCCTCCCAGCACAGTTACTATGACAGCGGGTTGGAAGAATCTGAGACCCCGAGCAGCAAGTCCTCTTCAGGTCCCAGGATTGGACCCCTGGCTCTCCCTGAGGACCACTACGAGAGGACCACCCCTGATGGCAGCATCGGTGAAATGGAGCACCCAGAAAATGGATGTGGTGATGTGGGTGTGGGGTAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU133122 lncRNA upstream 627295 21215621 ~ 21241493 (+) True G106391
TU133088 lncRNA upstream 734175 21134255 ~ 21134613 (+) True G106362
TU133087 lncRNA upstream 736358 21131698 ~ 21132430 (+) True G106361
TU133072 lncRNA upstream 835600 21028793 ~ 21033188 (+) True G106347
TU133048 lncRNA upstream 846669 21020210 ~ 21022119 (+) True G106327
TU133180 lncRNA downstream 50566 21926899 ~ 21928577 (+) True G106443
TU133192 lncRNA downstream 56271 21932604 ~ 22062654 (+) True G106455
TU133195 lncRNA downstream 213724 22090057 ~ 22090265 (+) True G106457
TU133202 lncRNA downstream 435381 22311714 ~ 22311963 (+) True G106464
TU133216 lncRNA downstream 666946 22543279 ~ 22544072 (+) True G106478
AMCG00011388 mRNA upstream 70825 21792528 ~ 21797963 (+) True AMCG00011388
AMCG00011387 mRNA upstream 482925 21319424 ~ 21385863 (+) True AMCG00011387
AMCG00011381 mRNA upstream 632033 21227210 ~ 21236755 (+) True AMCG00011381
AMCG00011380 mRNA upstream 737253 21127110 ~ 21131535 (+) True AMCG00011380
AMCG00011374 mRNA upstream 910341 20954794 ~ 20958447 (+) True AMCG00011374
AMCG00011389 mRNA downstream 47626 21923959 ~ 21924258 (+) True AMCG00011389
AMCG00011392 mRNA downstream 627639 22503972 ~ 22506745 (+) True AMCG00011392
AMCG00011394 mRNA downstream 723585 22599918 ~ 22603575 (+) True AMCG00011394
AMCG00011395 mRNA downstream 727683 22604016 ~ 22630597 (+) True AMCG00011395
AMCG00011397 mRNA downstream 769699 22646032 ~ 22650834 (+) True AMCG00011397
TU132939 other upstream 1501565 20361208 ~ 20367223 (+) True G106242
TU132823 other upstream 1529701 20296011 ~ 20339087 (+) False AMCG00011365
TU132810 other upstream 1705822 20095229 ~ 20162966 (+) False G106139
TU133378 other downstream 1464975 23341308 ~ 23341765 (+) True G106613
TU133383 other downstream 1479729 23356062 ~ 23356559 (+) True G106618
TU133489 other downstream 1872341 23748674 ~ 23753002 (+) True G106711
TU133992 other downstream 4479834 26356167 ~ 26360775 (+) True AMCG00011476
TU134100 other downstream 4894105 26770438 ~ 26771214 (+) True G107202

Expression Profile