Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00011394 |
| length | 603 |
| RNA type | mRNA |
| GC content | 0.63 |
| exon number | 3 |
| gene id | AMCG00011394 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030133.1 |
| NCBI id | CM030133.1 |
| chromosome length | 32682731 |
| location | 22599918 ~ 22603575 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0007275 | multicellular organism development | biological_process |
| GO:0016567 | protein ubiquitination | biological_process |
| GO:0006511 | ubiquitin-dependent protein catabolic process | biological_process |
| GO:0007093 | mitotic cell cycle checkpoint | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0004842 | ubiquitin-protein transferase activity | molecular_function |
| GO:0008270 | zinc ion binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU133223 | lncRNA | upstream | 32657 | 22564099 ~ 22567261 (+) | True | G106485 |
| TU133219 | lncRNA | upstream | 45428 | 22554259 ~ 22554490 (+) | True | G106481 |
| TU133217 | lncRNA | upstream | 52511 | 22547164 ~ 22547407 (+) | True | G106479 |
| TU133215 | lncRNA | upstream | 55483 | 22544184 ~ 22544435 (+) | True | G106477 |
| TU133216 | lncRNA | upstream | 55846 | 22543279 ~ 22544072 (+) | True | G106478 |
| TU133254 | lncRNA | downstream | 89162 | 22692737 ~ 22694844 (+) | True | G106513 |
| TU133347 | lncRNA | downstream | 259033 | 22862608 ~ 22862952 (+) | True | G106586 |
| TU133349 | lncRNA | downstream | 325554 | 22929129 ~ 22935544 (+) | True | G106588 |
| TU133371 | lncRNA | downstream | 603671 | 23207246 ~ 23207477 (+) | True | G106607 |
| TU133373 | lncRNA | downstream | 750053 | 23353628 ~ 23355643 (+) | True | G106609 |
| AMCG00011392 | mRNA | upstream | 93173 | 22503972 ~ 22506745 (+) | True | AMCG00011392 |
| AMCG00011389 | mRNA | upstream | 675660 | 21923959 ~ 21924258 (+) | True | AMCG00011389 |
| AMCG00011390 | mRNA | upstream | 723585 | 21868788 ~ 21876333 (+) | True | AMCG00011390 |
| AMCG00011388 | mRNA | upstream | 801955 | 21792528 ~ 21797963 (+) | True | AMCG00011388 |
| AMCG00011387 | mRNA | upstream | 1214055 | 21319424 ~ 21385863 (+) | True | AMCG00011387 |
| AMCG00011395 | mRNA | downstream | 441 | 22604016 ~ 22630597 (+) | True | AMCG00011395 |
| AMCG00011397 | mRNA | downstream | 42457 | 22646032 ~ 22650834 (+) | True | AMCG00011397 |
| AMCG00011396 | mRNA | downstream | 66166 | 22669741 ~ 22691805 (+) | True | AMCG00011396 |
| AMCG00011404 | mRNA | downstream | 140946 | 22744521 ~ 22749846 (+) | True | AMCG00011404 |
| AMCG00011405 | mRNA | downstream | 149075 | 22752650 ~ 22785942 (+) | True | AMCG00011405 |
| TU132939 | other | upstream | 2232695 | 20361208 ~ 20367223 (+) | True | G106242 |
| TU132823 | other | upstream | 2260831 | 20296011 ~ 20339087 (+) | False | AMCG00011365 |
| TU132810 | other | upstream | 2436952 | 20095229 ~ 20162966 (+) | False | G106139 |
| TU133378 | other | downstream | 737733 | 23341308 ~ 23341765 (+) | True | G106613 |
| TU133383 | other | downstream | 752487 | 23356062 ~ 23356559 (+) | True | G106618 |
| TU133489 | other | downstream | 1145099 | 23748674 ~ 23753002 (+) | True | G106711 |
| TU133992 | other | downstream | 3752592 | 26356167 ~ 26360775 (+) | True | AMCG00011476 |
| TU134100 | other | downstream | 4166863 | 26770438 ~ 26771214 (+) | True | G107202 |
