RNA id: AMCG00011418



Basic Information


Item Value
RNA id AMCG00011418
length 336
RNA type mRNA
GC content 0.45
exon number 2
gene id AMCG00011418
representative True

Chromosome Information


Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 23656670 ~ 23657442 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATTGCAgttgaaattaagaaaaaggtTTGGGACTGGTGGCTAGATGTGCCTTGCATCGATCATGTAGGCAGCTGTGTTTATGATAACATCTGTGAAAAACTGGATCAGATCTTCCCAGGAGATAGCTGCCCCTCAGAAATTCTTTCCATGGGCGGCTCCTGCCATTGTCCAATCCAACCGggtGTATTGCATATTCCTCCAACTACCCTCAACATCCCCAAAGTCAAGCTTCCTTCCTTTCTCACCGATGGTGAATTCCAACTTCACATCACTGCCAACAGCGGAACACAACAAATTGCCTGTTTCCAGACCACTATTACCTTGAATATGAAATAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU133407 lncRNA upstream 115942 23539365 ~ 23540728 (+) True G106640
TU133398 lncRNA upstream 134739 23382282 ~ 23521931 (+) True G106631
TU133385 lncRNA upstream 295656 23356734 ~ 23361014 (+) True G106619
TU133373 lncRNA upstream 301027 23353628 ~ 23355643 (+) True G106609
TU133371 lncRNA upstream 449193 23207246 ~ 23207477 (+) True G106607
TU133503 lncRNA downstream 171847 23829289 ~ 23833300 (+) True G106718
TU133524 lncRNA downstream 184490 23841932 ~ 23844911 (+) False AMCG00011430
TU133535 lncRNA downstream 283570 23941012 ~ 23971183 (+) True G106742
TU133666 lncRNA downstream 1262409 24919851 ~ 24943678 (+) True G106863
TU133676 lncRNA downstream 1281580 24939022 ~ 24940823 (+) True G106871
AMCG00011419 mRNA upstream 33370 23622780 ~ 23623300 (+) True AMCG00011419
AMCG00011416 mRNA upstream 57458 23592543 ~ 23599212 (+) True AMCG00011416
AMCG00011417 mRNA upstream 241528 23403856 ~ 23415142 (+) True AMCG00011417
AMCG00011411 mRNA upstream 335289 23288041 ~ 23321381 (+) True AMCG00011411
AMCG00011410 mRNA upstream 393832 23240188 ~ 23262838 (+) True AMCG00011410
AMCG00011420 mRNA downstream 5582 23663024 ~ 23677276 (+) True AMCG00011420
AMCG00011425 mRNA downstream 102847 23760289 ~ 23775508 (+) True AMCG00011425
AMCG00011426 mRNA downstream 129521 23786963 ~ 23813716 (+) True AMCG00011426
AMCG00011430 mRNA downstream 178377 23835819 ~ 23844867 (+) True AMCG00011430
AMCG00011429 mRNA downstream 252258 23909700 ~ 23938038 (+) True AMCG00011429
TU133383 other upstream 300111 23356062 ~ 23356559 (+) True G106618
TU133378 other upstream 314905 23341308 ~ 23341765 (+) True G106613
TU132939 other upstream 3289447 20361208 ~ 20367223 (+) True G106242
TU132823 other upstream 3317583 20296011 ~ 20339087 (+) False AMCG00011365
TU132801 other upstream 3493704 20118575 ~ 20162966 (+) False G106139
TU133489 other downstream 91232 23748674 ~ 23753002 (+) True G106711
TU133992 other downstream 2698725 26356167 ~ 26360775 (+) True AMCG00011476
TU134100 other downstream 3112996 26770438 ~ 26771214 (+) True G107202
TU134126 other downstream 3160610 26818052 ~ 26830055 (+) False AMCG00011488
TU134311 other downstream 4054764 27712206 ~ 27727867 (+) True G107394

Expression Profile