RNA id: AMCG00011424


Basic Information

Item Value
RNA id AMCG00011424
length 375
RNA type mRNA
GC content 0.45
exon number 2
gene id AMCG00011424
representative True

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 23610729 ~ 23611511 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGTGGTTTCATGTGATTcgatttctgtttttctttcttgccaGATTTCTGTTGACTTGAAGAAAAAGATTTTGGGCTTTTTTGTAGAAGTGCCTTGCATCGATCATGTAGGCAGCTGTGTTTATGATAACATCTGTGAAAAACTGGATCAGATCTTCCCAGGAGATAGCTGCCCCTCAGACATTCTCTCCATGGGCGGCTCCTGCCATTGTCCAATCCTACCGGGTGTATTGCATATTCCTCAAACTACTGTCCACATCCCCGAAACCAAGCTTCCTTCCTTTCTCACCGATGGCGAATTCCATCTCCATGTCACCGCCAACAGCGGAAAAAAACAAGTTGCCTGTTTCCAGACCACTGTTACCTTGACATAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU133456 lncRNA downstream 19420 23591101 ~ 23591309 (-) True G106682
TU133432 lncRNA downstream 92926 23517378 ~ 23517803 (-) True G106665
TU133416 lncRNA downstream 211637 23396513 ~ 23399092 (-) False AMCG00011414
TU133370 lncRNA downstream 433150 23177228 ~ 23177579 (-) True G106606
TU133368 lncRNA downstream 433600 23176857 ~ 23177129 (-) True G106604
TU133511 lncRNA upstream 184169 23795680 ~ 23797219 (-) True G106723
TU133519 lncRNA upstream 202346 23813857 ~ 23817543 (-) True AMCG00011428
TU133521 lncRNA upstream 217787 23829298 ~ 23834974 (-) True AMCG00011427
TU133612 lncRNA upstream 970445 24581956 ~ 24582174 (-) True G106817
TU133665 lncRNA upstream 1304653 24916164 ~ 24919197 (-) True G106862
AMCG00011421 mRNA downstream 48800 23518801 ~ 23561929 (-) True AMCG00011421
AMCG00011415 mRNA downstream 102365 23498826 ~ 23508364 (-) True AMCG00011415
AMCG00011414 mRNA downstream 121087 23393104 ~ 23489642 (-) True AMCG00011414
AMCG00011413 mRNA downstream 249579 23350909 ~ 23361150 (-) True AMCG00011413
AMCG00011412 mRNA downstream 264888 23341000 ~ 23345841 (-) True AMCG00011412
AMCG00011423 mRNA upstream 127265 23738776 ~ 23741793 (-) True AMCG00011423
AMCG00011422 mRNA upstream 131567 23743078 ~ 23749052 (-) True AMCG00011422
AMCG00011428 mRNA upstream 203002 23814513 ~ 23815783 (-) False AMCG00011428
AMCG00011427 mRNA upstream 217786 23829297 ~ 23835074 (-) False AMCG00011427
AMCG00011431 mRNA upstream 354608 23966119 ~ 23979763 (-) True AMCG00011431
TU133362 other downstream 549763 23053316 ~ 23060966 (-) True AMCG00011409
TU132729 other downstream 3742827 19865614 ~ 19867902 (-) True AMCG00011356
TU132572 other downstream 4197714 19410368 ~ 19413015 (-) False G105970
TU132457 other downstream 4505460 19102293 ~ 19105269 (-) True G105890
TU132383 other downstream 5419534 18184484 ~ 18191195 (-) False AMCG00011316
TU133710 other upstream 1400694 25012205 ~ 25018332 (-) True AMCG00011445
TU134083 other upstream 2895432 26506943 ~ 26516507 (-) True AMCG00011485
TU134703 other upstream 6013573 29625084 ~ 29625387 (-) True G107713

Expression Profile