RNA id: AMCG00011452



Basic Information


Item Value
RNA id AMCG00011452
length 468
RNA type mRNA
GC content 0.41
exon number 2
gene id AMCG00011452
representative True

Chromosome Information


Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 25170708 ~ 25171196 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGGAGGAGAGGTTATTTACTGCTGCATCAAGCAAAAATTCAAGTGTATCAGCTGAAAATACCTTGAGGTATGCGGACTTGCTTgaaaagtttaaagttttagAACCAGCAAACTGGCCTGAGCCCTTGTATGAACATTATGGAGAGATTTGCATCAAACAGCTTGCATATCAGTTTACACTTGACACAAGAAATTATAAAGAGGACACCAGAGTCATACCAGATGGATTGGCCACACTAACCAATATCATGAACCTAATACTTGTGGGCAGTGCCGAATGTGAACGAGGATTCAGTCTAATGAATACTATCATTAGCCCTATACGGAGCAATCTCCTGCTGAAGAATGTTTCTGCCCTAATATTTATCAACATGAATGGCAGTCCATTGCAAAAATGGAACCCAAAAGAGTATGTCAGGTCTTGGTTGTTAAAACACAGGGGAGCCTCTGATACACGGTCACACACA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU133720 lncRNA upstream 121561 25047524 ~ 25049147 (+) True G106906
TU133680 lncRNA upstream 179471 24986838 ~ 24991237 (+) True G106874
TU133681 lncRNA upstream 179534 24986838 ~ 24991174 (+) False G106874
TU133666 lncRNA upstream 227030 24919851 ~ 24943678 (+) True G106863
TU133765 lncRNA downstream 166356 25337552 ~ 25337767 (+) True G106946
TU133766 lncRNA downstream 200283 25371479 ~ 25371745 (+) True G106947
TU133779 lncRNA downstream 440423 25611619 ~ 25611879 (+) False AMCG00011455
TU133783 lncRNA downstream 494928 25666124 ~ 25667782 (+) True G106961
TU133788 lncRNA downstream 503220 25674416 ~ 25677419 (+) True G106966
AMCG00011453 mRNA upstream 38 25169500 ~ 25170670 (+) True AMCG00011453
AMCG00011449 mRNA upstream 56215 25106328 ~ 25114493 (+) True AMCG00011449
AMCG00011451 mRNA upstream 65603 25094529 ~ 25105105 (+) True AMCG00011451
AMCG00011450 mRNA upstream 77220 25071737 ~ 25093488 (+) True AMCG00011450
AMCG00011444 mRNA upstream 123494 25044205 ~ 25047214 (+) True AMCG00011444
AMCG00011455 mRNA downstream 436790 25607986 ~ 25662179 (+) True AMCG00011455
AMCG00011458 mRNA downstream 590640 25761836 ~ 25766078 (+) True AMCG00011458
AMCG00011461 mRNA downstream 631716 25802912 ~ 25811978 (+) True AMCG00011461
AMCG00011460 mRNA downstream 678377 25849573 ~ 25877546 (+) True AMCG00011460
AMCG00011462 mRNA downstream 742328 25913524 ~ 25916673 (+) True AMCG00011462
TU133489 other upstream 1417706 23748674 ~ 23753002 (+) True G106711
TU133383 other upstream 1814149 23356062 ~ 23356559 (+) True G106618
TU133378 other upstream 1828943 23341308 ~ 23341765 (+) True G106613
TU132939 other upstream 4803485 20361208 ~ 20367223 (+) True G106242
TU132823 other upstream 4831621 20296011 ~ 20339087 (+) False AMCG00011365
TU133992 other downstream 1184971 26356167 ~ 26360775 (+) True AMCG00011476
TU134100 other downstream 1599242 26770438 ~ 26771214 (+) True G107202
TU134126 other downstream 1646856 26818052 ~ 26830055 (+) False AMCG00011488
TU134311 other downstream 2541010 27712206 ~ 27727867 (+) True G107394
TU134734 other downstream 4526405 29697601 ~ 29699419 (+) True G107741

Expression Profile