RNA id: AMCG00011465


Basic Information

Item Value
RNA id AMCG00011465
length 650
RNA type mRNA
GC content 0.42
exon number 4
gene id AMCG00011465
representative True

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 26017176 ~ 26019400 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGAAGTCTAGAGCTTCAGGACAGATAACCAATATCAGTGCCAATACCTGTGCCcaaaattcaatatttaattttgattttgtagGCTGGGTAAGAGGAGCCAGCATTCCGGATGGAGCGACAGAACCCACCTGCCACAGCTACCCTCTCCCGGCCTGCACCCGGCACTACGATCCTGTGTGTGGCTCGGATGGAGTAACCTATTCCAATGAATGCATGCTCTGCCTTGAGAACATGGAACGCAAGGTGAACTTCTTCATCCAGCGGAAGGGGGAatgctgacttttttttttttttaaactgaagatCTGCTGAGACTTTTAATGCTATGTGATGTAAATCTGTTTTCAAGCTCTAATAAAATTTCACAATTGTAGAGCCTTTCCGGTTCATTCCAGGGCCTGTATTCCATAGCTTCAAAATCATTGCCGATCCTGCATTCAAAACCGGATTCCTTACCGATGGCAAACTtctgaaagctgtgtttttcagGGGGGTTGAGGATATTGCTGCATTCTAGGAGAGTTTGGAAGAGGTAAACCTGAGAAAacaaatttgtataatttgGTATAGAACCCTTTGCAAAGTGGACACTGTGCTTTacagattaatacaaaattataaataaaaacctacatGAAGCAGAGAAA

Function

GO:

id name namespace
GO:0010466 negative regulation of peptidase activity biological_process
GO:0052548 regulation of endopeptidase activity biological_process
GO:0030414 peptidase inhibitor activity molecular_function

KEGG:

id description
K23417 SPINK1; serine protease inhibitor Kazal-type 1

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU133879 lncRNA downstream 496 26015984 ~ 26016680 (-) True G107038
TU133878 lncRNA downstream 4729 26009520 ~ 26012447 (-) True G107037
TU133876 lncRNA downstream 10720 26005979 ~ 26006456 (-) True G107035
TU133694 lncRNA downstream 1026000 24986805 ~ 24991176 (-) True G106885
TU133665 lncRNA downstream 1097979 24916164 ~ 24919197 (-) True G106862
TU133901 lncRNA upstream 75405 26094805 ~ 26127765 (-) True G107057
TU133934 lncRNA upstream 176712 26196112 ~ 26197833 (-) True G107082
TU134042 lncRNA upstream 292443 26311843 ~ 26329609 (-) True G107166
TU134043 lncRNA upstream 368812 26388212 ~ 26409375 (-) True G107167
TU134045 lncRNA upstream 368812 26388212 ~ 26398851 (-) False G107167
AMCG00011463 mRNA downstream 118349 25877496 ~ 25898827 (-) True AMCG00011463
AMCG00011459 mRNA downstream 236084 25779962 ~ 25781092 (-) True AMCG00011459
AMCG00011457 mRNA downstream 286639 25729469 ~ 25730537 (-) True AMCG00011457
AMCG00011456 mRNA downstream 311508 25681915 ~ 25705668 (-) True AMCG00011456
AMCG00011454 mRNA downstream 900759 25115557 ~ 25116417 (-) True AMCG00011454
AMCG00011470 mRNA upstream 94469 26113869 ~ 26120015 (-) True AMCG00011470
AMCG00011469 mRNA upstream 119566 26138966 ~ 26162878 (-) True AMCG00011469
AMCG00011474 mRNA upstream 171726 26191126 ~ 26195850 (-) True AMCG00011474
AMCG00011475 mRNA upstream 300621 26320021 ~ 26334761 (-) True AMCG00011475
AMCG00011482 mRNA upstream 329188 26348588 ~ 26362055 (-) True AMCG00011482
TU133710 other downstream 998844 25012205 ~ 25018332 (-) True AMCG00011445
TU133362 other downstream 2956210 23053316 ~ 23060966 (-) True AMCG00011409
TU132729 other downstream 6149274 19865614 ~ 19867902 (-) True AMCG00011356
TU132572 other downstream 6604161 19410368 ~ 19413015 (-) False G105970
TU132457 other downstream 6911907 19102293 ~ 19105269 (-) True G105890
TU134083 other upstream 487543 26506943 ~ 26516507 (-) True AMCG00011485
TU134703 other upstream 3605684 29625084 ~ 29625387 (-) True G107713

Expression Profile