RNA id: AMCG00011476



Basic Information


Item Value
RNA id AMCG00011476
length 204
RNA type mRNA
GC content 0.55
exon number 3
gene id AMCG00011476
representative False

Chromosome Information


Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 26356167 ~ 26360775 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGTTAGAGCAGAGGTCCGTCGATCCAATCCAAGCCCTCAGAGAAcctcACTGTGAGGAGTACTCTGATGGGATTTGCTCCAAGGAGTTTGATCCTGTGTGTGGGACAGACGGCAAGTCCTACAACACTGAGTGTGTGCTCTGTATGGAAAACAACACCGCAGACCGGGAGGGTTCCCAGCAGGCCGGCAGCGTCGAGGGCTAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU133952 lncRNA upstream 66418 26277374 ~ 26292447 (+) True G107098
TU133936 lncRNA upstream 156246 26199950 ~ 26202619 (+) True G107084
TU133839 lncRNA upstream 470027 25882692 ~ 25888838 (+) True G107004
TU133824 lncRNA upstream 563253 25795413 ~ 25795612 (+) True G106994
TU133796 lncRNA upstream 638279 25698252 ~ 25720586 (+) True G106973
TU134002 lncRNA downstream 27108 26387748 ~ 26387984 (+) True G107126
TU134004 lncRNA downstream 86562 26447202 ~ 26451575 (+) True G107128
TU134125 lncRNA downstream 478801 26839441 ~ 26842778 (+) False AMCG00011488
TU134230 lncRNA downstream 1106764 27467404 ~ 27468567 (+) True G107321
TU134242 lncRNA downstream 1136687 27497327 ~ 27501442 (+) True G107331
AMCG00011472 mRNA upstream 94338 26245927 ~ 26264527 (+) True AMCG00011472
AMCG00011471 mRNA upstream 116838 26240373 ~ 26242027 (+) True AMCG00011471
AMCG00011473 mRNA upstream 159516 26189132 ~ 26199349 (+) True AMCG00011473
AMCG00011467 mRNA upstream 223087 26127315 ~ 26135778 (+) True AMCG00011467
AMCG00011468 mRNA upstream 246011 26081951 ~ 26112854 (+) True AMCG00011468
AMCG00011483 mRNA downstream 27654 26388294 ~ 26397982 (+) True AMCG00011483
AMCG00011478 mRNA downstream 41325 26401965 ~ 26409373 (+) True AMCG00011478
AMCG00011477 mRNA downstream 52661 26413301 ~ 26435458 (+) True AMCG00011477
AMCG00011488 mRNA downstream 466681 26827321 ~ 26842792 (+) True AMCG00011488
AMCG00011491 mRNA downstream 549711 26910351 ~ 26923941 (+) True AMCG00011491
TU133489 other upstream 2605863 23748674 ~ 23753002 (+) True G106711
TU133383 other upstream 3002306 23356062 ~ 23356559 (+) True G106618
TU133378 other upstream 3017100 23341308 ~ 23341765 (+) True G106613
TU132939 other upstream 5991642 20361208 ~ 20367223 (+) True G106242
TU132823 other upstream 6019778 20296011 ~ 20339087 (+) False AMCG00011365
TU134100 other downstream 409798 26770438 ~ 26771214 (+) True G107202
TU134126 other downstream 457412 26818052 ~ 26830055 (+) False AMCG00011488
TU134311 other downstream 1351566 27712206 ~ 27727867 (+) True G107394
TU134734 other downstream 3336961 29697601 ~ 29699419 (+) True G107741
TU134787 other downstream 3497330 29857970 ~ 29875476 (+) True G107784

Expression Profile