RNA id: AMCG00011481



Basic Information


Item Value
RNA id AMCG00011481
length 210
RNA type mRNA
GC content 0.53
exon number 2
gene id AMCG00011481
representative True

Chromosome Information


Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 26369321 ~ 26369867 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGAGCTACTGTAGTAACACAGCATGCTGTATAGATTGTGTTGATGACTGGTGTTGTCCTAATCTAGCCGAATCCACAATCAAGACAGAGGAGCAGATGGGGACAGGAGCCGAGAACAGGAGGCTGGAGAGGAAGCAGCAGCAAAAGCCCCAGCCCGTCATCCACGTCTCCTCCAAACCCACCCTGGAGAACCAGTGCGCGCAGCAATAG

Function


GO: NA

KEGG:

id description
ko03013 Nucleocytoplasmic transport
ko04111 Cell cycle - yeast

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU134042 lncRNA downstream 39712 26311843 ~ 26329609 (-) True G107166
TU133934 lncRNA downstream 171488 26196112 ~ 26197833 (-) True G107082
TU133901 lncRNA downstream 241556 26094805 ~ 26127765 (-) True G107057
TU133880 lncRNA downstream 350588 26017239 ~ 26018733 (-) False AMCG00011465
TU133879 lncRNA downstream 352641 26015984 ~ 26016680 (-) True G107038
TU134043 lncRNA upstream 18345 26388212 ~ 26409375 (-) True G107167
TU134045 lncRNA upstream 18345 26388212 ~ 26398851 (-) False G107167
TU134049 lncRNA upstream 18345 26388212 ~ 26409375 (-) False G107167
TU134130 lncRNA upstream 463698 26833565 ~ 26833850 (-) True G107232
TU134131 lncRNA upstream 468300 26838167 ~ 26842786 (-) True G107233
AMCG00011480 mRNA downstream 1205 26362391 ~ 26368116 (-) True AMCG00011480
AMCG00011482 mRNA downstream 7266 26348588 ~ 26362055 (-) True AMCG00011482
AMCG00011475 mRNA downstream 34560 26320021 ~ 26334761 (-) True AMCG00011475
AMCG00011474 mRNA downstream 173471 26191126 ~ 26195850 (-) True AMCG00011474
AMCG00011469 mRNA downstream 206443 26138966 ~ 26162878 (-) True AMCG00011469
AMCG00011479 mRNA upstream 306 26370173 ~ 26377379 (-) True AMCG00011479
AMCG00011484 mRNA upstream 76713 26446580 ~ 26490473 (-) True AMCG00011484
AMCG00011485 mRNA upstream 139847 26509714 ~ 26516336 (-) False AMCG00011485
AMCG00011486 mRNA upstream 201305 26571172 ~ 26641966 (-) True AMCG00011486
AMCG00011487 mRNA upstream 318547 26688414 ~ 26731680 (-) True AMCG00011487
TU133710 other downstream 1350989 25012205 ~ 25018332 (-) True AMCG00011445
TU133362 other downstream 3308355 23053316 ~ 23060966 (-) True AMCG00011409
TU132729 other downstream 6501419 19865614 ~ 19867902 (-) True AMCG00011356
TU132572 other downstream 6956306 19410368 ~ 19413015 (-) False G105970
TU132457 other downstream 7264052 19102293 ~ 19105269 (-) True G105890
TU134083 other upstream 137076 26506943 ~ 26516507 (-) True AMCG00011485
TU134703 other upstream 3255217 29625084 ~ 29625387 (-) True G107713

Expression Profile