RNA id: AMCG00011485


Basic Information

Item Value
RNA id AMCG00011485
length 288
RNA type mRNA
GC content 0.50
exon number 3
gene id AMCG00011485
representative False

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 26506943 ~ 26516507 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGAATCGCTGCACAGCCGCGCTACTGCTGCTGGTGATCGCGATTTACTCTCTCAATGTGGAAGCATATAAGTGCAAGTGCACAAGAAAGGGGCCCAAGATTCGTTACAAGGACGTGCAGAAGCTGGAGATCAAACCCAAACACCCCTTCTGCCAGGAGAAGATGATTTTTGTAACCATGGAGAACGTTTCTCGCTTCAAAGGGCAGGAGTACTGCCTGCACCCCAAACTGCGCAGCACTAAGAACCTCGTGAAGTGGTACAAGATCTGGAAGGACAAGCACAGGTGA

Function

GO:

id name namespace
GO:0006955 immune response biological_process
GO:0060326 cell chemotaxis biological_process
GO:0005576 extracellular region cellular_component
GO:0008009 chemokine activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU134043 lncRNA downstream 100339 26388212 ~ 26409375 (-) True G107167
TU134049 lncRNA downstream 100339 26388212 ~ 26409375 (-) False G107167
TU134045 lncRNA downstream 110863 26388212 ~ 26398851 (-) False G107167
TU134042 lncRNA downstream 180105 26311843 ~ 26329609 (-) True G107166
TU133934 lncRNA downstream 311881 26196112 ~ 26197833 (-) True G107082
TU134130 lncRNA upstream 317229 26833565 ~ 26833850 (-) True G107232
TU134131 lncRNA upstream 321831 26838167 ~ 26842786 (-) True G107233
TU134137 lncRNA upstream 394179 26910515 ~ 26910758 (-) True G107237
TU134138 lncRNA upstream 395672 26912008 ~ 26912220 (-) True G107238
TU134141 lncRNA upstream 399176 26915512 ~ 26915968 (-) True G107241
AMCG00011484 mRNA downstream 19241 26446580 ~ 26490473 (-) True AMCG00011484
AMCG00011479 mRNA downstream 132335 26370173 ~ 26377379 (-) True AMCG00011479
AMCG00011481 mRNA downstream 139847 26369321 ~ 26369867 (-) True AMCG00011481
AMCG00011480 mRNA downstream 141598 26362391 ~ 26368116 (-) True AMCG00011480
AMCG00011482 mRNA downstream 147659 26348588 ~ 26362055 (-) True AMCG00011482
AMCG00011486 mRNA upstream 54836 26571172 ~ 26641966 (-) True AMCG00011486
AMCG00011487 mRNA upstream 172078 26688414 ~ 26731680 (-) True AMCG00011487
AMCG00011489 mRNA upstream 288546 26804882 ~ 26818358 (-) True AMCG00011489
AMCG00011492 mRNA upstream 415050 26931386 ~ 26943383 (-) True AMCG00011492
AMCG00011501 mRNA upstream 898852 27415188 ~ 27423491 (-) True AMCG00011501
TU133710 other downstream 1491382 25012205 ~ 25018332 (-) True AMCG00011445
TU133362 other downstream 3448748 23053316 ~ 23060966 (-) True AMCG00011409
TU132729 other downstream 6641812 19865614 ~ 19867902 (-) True AMCG00011356
TU132572 other downstream 7096699 19410368 ~ 19413015 (-) False G105970
TU132457 other downstream 7404445 19102293 ~ 19105269 (-) True G105890
TU134703 other upstream 3108748 29625084 ~ 29625387 (-) True G107713

Expression Profile