Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00011502 |
| length | 1567 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 9 |
| gene id | AMCG00011502 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030133.1 |
| NCBI id | CM030133.1 |
| chromosome length | 32682731 |
| location | 27484188 ~ 27496643 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0006633 | fatty acid biosynthetic process | biological_process |
| GO:0055114 | oxidation-reduction process | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0005506 | iron ion binding | molecular_function |
| GO:0016491 | oxidoreductase activity | molecular_function |
| id | description |
|---|---|
| K22282 | FAXDC2; fatty acid hydroxylase domain-containing protein 2 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU134230 | lncRNA | upstream | 15621 | 27467404 ~ 27468567 (+) | True | G107321 |
| TU134125 | lncRNA | upstream | 641410 | 26839441 ~ 26842778 (+) | False | AMCG00011488 |
| TU134004 | lncRNA | upstream | 1032613 | 26447202 ~ 26451575 (+) | True | G107128 |
| TU134002 | lncRNA | upstream | 1096204 | 26387748 ~ 26387984 (+) | True | G107126 |
| TU133952 | lncRNA | upstream | 1191741 | 26277374 ~ 26292447 (+) | True | G107098 |
| TU134242 | lncRNA | downstream | 684 | 27497327 ~ 27501442 (+) | True | G107331 |
| TU134298 | lncRNA | downstream | 117318 | 27613961 ~ 27615738 (+) | True | G107382 |
| TU134320 | lncRNA | downstream | 294223 | 27790866 ~ 27830847 (+) | False | G107402 |
| TU134321 | lncRNA | downstream | 294223 | 27790866 ~ 27874138 (+) | True | G107402 |
| TU134329 | lncRNA | downstream | 386452 | 27883095 ~ 27883396 (+) | True | G107408 |
| AMCG00011500 | mRNA | upstream | 2198 | 27472631 ~ 27481990 (+) | True | AMCG00011500 |
| AMCG00011499 | mRNA | upstream | 160243 | 27321672 ~ 27323945 (+) | True | AMCG00011499 |
| AMCG00011497 | mRNA | upstream | 185615 | 27297331 ~ 27298573 (+) | True | AMCG00011497 |
| AMCG00011498 | mRNA | upstream | 188365 | 27288443 ~ 27295823 (+) | True | AMCG00011498 |
| AMCG00011496 | mRNA | upstream | 200760 | 27280170 ~ 27283428 (+) | True | AMCG00011496 |
| AMCG00011505 | mRNA | downstream | 59657 | 27556300 ~ 27583803 (+) | True | AMCG00011505 |
| AMCG00011504 | mRNA | downstream | 95012 | 27591655 ~ 27595004 (+) | True | AMCG00011504 |
| AMCG00011510 | mRNA | downstream | 398873 | 27895516 ~ 27906851 (+) | True | AMCG00011510 |
| AMCG00011511 | mRNA | downstream | 411749 | 27908392 ~ 27915999 (+) | True | AMCG00011511 |
| AMCG00011512 | mRNA | downstream | 455656 | 27952299 ~ 27958923 (+) | True | AMCG00011512 |
| TU134126 | other | upstream | 654133 | 26818052 ~ 26830055 (+) | False | AMCG00011488 |
| TU134100 | other | upstream | 712974 | 26770438 ~ 26771214 (+) | True | G107202 |
| TU133992 | other | upstream | 1123413 | 26356167 ~ 26360775 (+) | True | AMCG00011476 |
| TU133489 | other | upstream | 3731186 | 23748674 ~ 23753002 (+) | True | G106711 |
| TU133383 | other | upstream | 4127629 | 23356062 ~ 23356559 (+) | True | G106618 |
| TU134311 | other | downstream | 215563 | 27712206 ~ 27727867 (+) | True | G107394 |
| TU134734 | other | downstream | 2200958 | 29697601 ~ 29699419 (+) | True | G107741 |
| TU134787 | other | downstream | 2361327 | 29857970 ~ 29875476 (+) | True | G107784 |
| TU134867 | other | downstream | 2675145 | 30171788 ~ 30212090 (+) | True | G107858 |
| TU135008 | other | downstream | 3487336 | 30983979 ~ 31173789 (+) | True | AMCG00011551 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| grasscarp (Ctenopharyngodon idella) | CI01000014_00960029_00966472.mRNA | True | 1493 | mRNA | 0.50 | 7 | CI01000014 | 959499 ~ 966472 (-) |
