Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00011516 |
| length | 298 |
| RNA type | mRNA |
| GC content | 0.48 |
| exon number | 2 |
| gene id | AMCG00011516 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030133.1 |
| NCBI id | CM030133.1 |
| chromosome length | 32682731 |
| location | 28548503 ~ 28556689 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0048738 | cardiac muscle tissue development | biological_process |
| GO:0007525 | somatic muscle development | biological_process |
| GO:0048798 | swim bladder inflation | biological_process |
| GO:0007368 | determination of left/right symmetry | biological_process |
| GO:0060047 | heart contraction | biological_process |
| GO:0042383 | sarcolemma | cellular_component |
| GO:0016012 | sarcoglycan complex | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU134387 | lncRNA | upstream | 260112 | 28288150 ~ 28288391 (+) | True | G107450 |
| TU134329 | lncRNA | upstream | 665107 | 27883095 ~ 27883396 (+) | True | G107408 |
| TU134321 | lncRNA | upstream | 674365 | 27790866 ~ 27874138 (+) | True | G107402 |
| TU134320 | lncRNA | upstream | 717656 | 27790866 ~ 27830847 (+) | False | G107402 |
| TU134298 | lncRNA | upstream | 932765 | 27613961 ~ 27615738 (+) | True | G107382 |
| TU134446 | lncRNA | downstream | 109477 | 28666166 ~ 28666386 (+) | True | G107502 |
| TU134459 | lncRNA | downstream | 157434 | 28714123 ~ 28714489 (+) | True | G107513 |
| TU134477 | lncRNA | downstream | 239198 | 28795887 ~ 28863757 (+) | True | G107530 |
| TU134502 | lncRNA | downstream | 313881 | 28870570 ~ 28876355 (+) | False | AMCG00011519 |
| TU134578 | lncRNA | downstream | 524542 | 29081231 ~ 29161742 (+) | True | G107618 |
| AMCG00011512 | mRNA | upstream | 589580 | 27952299 ~ 27958923 (+) | True | AMCG00011512 |
| AMCG00011511 | mRNA | upstream | 632504 | 27908392 ~ 27915999 (+) | True | AMCG00011511 |
| AMCG00011510 | mRNA | upstream | 641652 | 27895516 ~ 27906851 (+) | True | AMCG00011510 |
| AMCG00011504 | mRNA | upstream | 953499 | 27591655 ~ 27595004 (+) | True | AMCG00011504 |
| AMCG00011505 | mRNA | upstream | 964700 | 27556300 ~ 27583803 (+) | True | AMCG00011505 |
| AMCG00011513 | mRNA | downstream | 14933 | 28571622 ~ 28574341 (+) | True | AMCG00011513 |
| AMCG00011518 | mRNA | downstream | 220344 | 28777033 ~ 28789389 (+) | True | AMCG00011518 |
| AMCG00011519 | mRNA | downstream | 312453 | 28869142 ~ 28875839 (+) | True | AMCG00011519 |
| AMCG00011523 | mRNA | downstream | 394621 | 28951310 ~ 28967738 (+) | True | AMCG00011523 |
| AMCG00011525 | mRNA | downstream | 562153 | 29118842 ~ 29139529 (+) | True | AMCG00011525 |
| TU134311 | other | upstream | 820636 | 27712206 ~ 27727867 (+) | True | G107394 |
| TU134126 | other | upstream | 1718448 | 26818052 ~ 26830055 (+) | False | AMCG00011488 |
| TU134100 | other | upstream | 1777289 | 26770438 ~ 26771214 (+) | True | G107202 |
| TU133992 | other | upstream | 2187728 | 26356167 ~ 26360775 (+) | True | AMCG00011476 |
| TU133489 | other | upstream | 4795501 | 23748674 ~ 23753002 (+) | True | G106711 |
| TU134734 | other | downstream | 1140912 | 29697601 ~ 29699419 (+) | True | G107741 |
| TU134787 | other | downstream | 1301281 | 29857970 ~ 29875476 (+) | True | G107784 |
| TU134867 | other | downstream | 1615099 | 30171788 ~ 30212090 (+) | True | G107858 |
| TU135008 | other | downstream | 2427290 | 30983979 ~ 31173789 (+) | True | AMCG00011551 |
