Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00011517 |
| length | 657 |
| RNA type | mRNA |
| GC content | 0.58 |
| exon number | 5 |
| gene id | AMCG00011517 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030133.1 |
| NCBI id | CM030133.1 |
| chromosome length | 32682731 |
| location | 28024230 ~ 28025901 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0006355 | regulation of transcription, DNA-templated | biological_process |
| GO:0006468 | protein phosphorylation | biological_process |
| GO:0007049 | cell cycle | biological_process |
| GO:0051301 | cell division | biological_process |
| GO:0007155 | cell adhesion | biological_process |
| GO:0007165 | signal transduction | biological_process |
| GO:0005856 | cytoskeleton | cellular_component |
| GO:0030496 | midbody | cellular_component |
| GO:0032154 | cleavage furrow | cellular_component |
| GO:0005634 | nucleus | cellular_component |
| GO:0030027 | lamellipodium | cellular_component |
| GO:0030054 | cell junction | cellular_component |
| GO:0016020 | membrane | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0005524 | ATP binding | molecular_function |
| GO:0004697 | protein kinase C activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU134332 | lncRNA | downstream | 136461 | 27887467 ~ 27887769 (-) | True | G107411 |
| TU134330 | lncRNA | downstream | 140650 | 27883048 ~ 27883580 (-) | True | G107409 |
| TU134325 | lncRNA | downstream | 179223 | 27790895 ~ 27845007 (-) | False | G107406 |
| TU134327 | lncRNA | downstream | 184765 | 27790895 ~ 27839465 (-) | True | G107406 |
| TU134299 | lncRNA | downstream | 408492 | 27613935 ~ 27615738 (-) | True | G107383 |
| TU134413 | lncRNA | upstream | 537166 | 28563067 ~ 28563577 (-) | True | G107471 |
| TU134447 | lncRNA | upstream | 640261 | 28666162 ~ 28666386 (-) | True | G107503 |
| TU134553 | lncRNA | upstream | 906936 | 28932837 ~ 28933182 (-) | True | G107597 |
| TU134561 | lncRNA | upstream | 908396 | 28934297 ~ 28967451 (-) | True | G107602 |
| TU134600 | lncRNA | upstream | 1176664 | 29202565 ~ 29203192 (-) | True | G107638 |
| AMCG00011515 | mRNA | downstream | 71087 | 27916933 ~ 27953143 (-) | True | AMCG00011515 |
| AMCG00011514 | mRNA | downstream | 128919 | 27891757 ~ 27895311 (-) | True | AMCG00011514 |
| AMCG00011509 | mRNA | downstream | 311273 | 27712140 ~ 27712957 (-) | True | AMCG00011509 |
| AMCG00011508 | mRNA | downstream | 345084 | 27669795 ~ 27679146 (-) | True | AMCG00011508 |
| AMCG00011507 | mRNA | downstream | 384750 | 27620509 ~ 27639480 (-) | True | AMCG00011507 |
| AMCG00011520 | mRNA | upstream | 772329 | 28798230 ~ 28816286 (-) | True | AMCG00011520 |
| AMCG00011521 | mRNA | upstream | 797757 | 28823658 ~ 28851487 (-) | True | AMCG00011521 |
| AMCG00011522 | mRNA | upstream | 848232 | 28874133 ~ 28880153 (-) | True | AMCG00011522 |
| AMCG00011524 | mRNA | upstream | 946324 | 28972225 ~ 29043557 (-) | True | AMCG00011524 |
| AMCG00011528 | mRNA | upstream | 1183439 | 29209340 ~ 29222205 (-) | True | AMCG00011528 |
| TU134083 | other | downstream | 1507723 | 26506943 ~ 26516507 (-) | True | AMCG00011485 |
| TU133710 | other | downstream | 3005898 | 25012205 ~ 25018332 (-) | True | AMCG00011445 |
| TU133362 | other | downstream | 4963264 | 23053316 ~ 23060966 (-) | True | AMCG00011409 |
| TU132729 | other | downstream | 8156328 | 19865614 ~ 19867902 (-) | True | AMCG00011356 |
| TU132572 | other | downstream | 8611215 | 19410368 ~ 19413015 (-) | False | G105970 |
| TU134703 | other | upstream | 1599183 | 29625084 ~ 29625387 (-) | True | G107713 |
