RNA id: TU127844


Basic Information

Item Value
RNA id TU127844
length 364
lncRNA type inter_gene
GC content 0.30
exon number 1
gene id G102372
representative True

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 560434 ~ 560797 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

aaaaaaagaaaaaacttttacATAAAACCCTGGATCATTAATTTTACGTACTTTGAGttgaagaaatgtatttcttacagTCTCCACCTACAGCTGCTTTGCgctcatttgttttcaaacactCTCCAACaataagataaatatatttgtgcCAATCAGGGTTTCTTTGTGGACATGCAGAATTTctataaatatagtttttgtaatgttttgtaacaATTTTCTTTTCCTAGTAACTGTACGTGTTACTTGCTGACCACTCTTAGACTaattgaagtttaaaaaaaaaaaagttatggaattattttctttttaacacactGTGAGGACTCAATTGTACAGTTTGCTGTATGGGTAATatggt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU127839 lncRNA downstream 72903 487273 ~ 487531 (-) True G102367
TU127834 lncRNA downstream 272463 287749 ~ 287971 (-) True G102362
TU127832 lncRNA downstream 272741 287273 ~ 287693 (-) True G102360
TU127800 lncRNA downstream 428852 131350 ~ 131582 (-) True G102332
TU127918 lncRNA upstream 405165 965962 ~ 966216 (-) True G102432
TU127919 lncRNA upstream 413638 974435 ~ 974641 (-) True G102433
TU127932 lncRNA upstream 444320 1005117 ~ 1008128 (-) True G102443
TU127958 lncRNA upstream 588637 1149434 ~ 1151389 (-) True G102466
TU127962 lncRNA upstream 595759 1156556 ~ 1161075 (-) True G102470
AMCG00010797 mRNA downstream 367359 157490 ~ 193075 (-) True AMCG00010797
AMCG00010791 mRNA downstream 403637 151074 ~ 156797 (-) True AMCG00010791
AMCG00010794 mRNA downstream 410704 136369 ~ 149730 (-) True AMCG00010794
AMCG00010790 mRNA downstream 426340 133732 ~ 134094 (-) True AMCG00010790
AMCG00010796 mRNA downstream 427110 126979 ~ 133324 (-) True AMCG00010796
AMCG00010798 mRNA upstream 4434 565231 ~ 577174 (-) True AMCG00010798
AMCG00010799 mRNA upstream 27059 587856 ~ 629893 (-) True AMCG00010799
AMCG00010802 mRNA upstream 374386 935183 ~ 943466 (-) True AMCG00010802
AMCG00010806 mRNA upstream 473033 1033830 ~ 1034790 (-) False AMCG00010806
AMCG00010807 mRNA upstream 481204 1042001 ~ 1056921 (-) True AMCG00010807
TU127810 other downstream 410605 145945 ~ 149829 (-) False AMCG00010794
TU127921 other upstream 414756 975553 ~ 978127 (-) True G102434
TU127939 other upstream 473124 1033921 ~ 1034874 (-) True AMCG00010806
TU128333 other upstream 2179019 2739816 ~ 2778023 (-) True G102762
TU128350 other upstream 2197681 2758478 ~ 2761264 (-) True G102774
TU128533 other upstream 2619173 3179970 ~ 3182619 (-) True G102902

Expression Profile