RNA id: TU128021



Basic Information


Item Value
RNA id TU128021
length 213
lncRNA type inter_gene
GC content 0.48
exon number 1
gene id G102516
representative True

Chromosome Information


Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 1474998 ~ 1475210 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


gtagtctcctctgttccaggtgaaaaggttcaggtcctcagtctctcagtaggacattcccttcagacctggaataagtctggttgctctcctctgaactgcctctagagcagcgatatctttcttgaagtgtggagcccagaactgtccacagtatccagatgagctctaactagtgcattgtacagtctgaacatcactgcccttgttctc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU127905 lncRNA upstream 349815 1046402 ~ 1125183 (+) False AMCG00010809
TU127892 lncRNA upstream 508793 965961 ~ 966205 (+) True G102415
TU127871 lncRNA upstream 667774 806994 ~ 807224 (+) True G102396
TU127845 lncRNA upstream 911805 560886 ~ 563193 (+) True G102373
TU127835 lncRNA upstream 1081945 392730 ~ 393053 (+) True G102363
TU128023 lncRNA downstream 43189 1518399 ~ 1518698 (+) True G102518
TU128025 lncRNA downstream 72600 1547810 ~ 1548180 (+) True G102520
TU128059 lncRNA downstream 487536 1962746 ~ 1963952 (+) False AMCG00010830
TU128134 lncRNA downstream 699586 2174796 ~ 2175064 (+) True G102611
TU128145 lncRNA downstream 776893 2252103 ~ 2252470 (+) True G102622
AMCG00010825 mRNA upstream 15009 1458829 ~ 1459989 (+) True AMCG00010825
AMCG00010824 mRNA upstream 17269 1457490 ~ 1457729 (+) True AMCG00010824
AMCG00010823 mRNA upstream 22468 1428644 ~ 1452530 (+) True AMCG00010823
AMCG00010822 mRNA upstream 56031 1378997 ~ 1418967 (+) True AMCG00010822
AMCG00010820 mRNA upstream 106130 1362897 ~ 1368868 (+) True AMCG00010820
AMCG00010826 mRNA downstream 375574 1850784 ~ 1859425 (+) True AMCG00010826
AMCG00010830 mRNA downstream 469845 1945055 ~ 1963965 (+) True AMCG00010830
AMCG00010831 mRNA downstream 504409 1979619 ~ 1986242 (+) True AMCG00010831
AMCG00010832 mRNA downstream 564304 2039514 ~ 2064344 (+) True AMCG00010832
AMCG00010833 mRNA downstream 592455 2067665 ~ 2069500 (+) True AMCG00010833
TU128036 other downstream 314978 1790188 ~ 1791723 (+) True G102531
TU128040 other downstream 323230 1798440 ~ 1800751 (+) True G102535
TU128102 other downstream 576936 2052146 ~ 2056347 (+) False AMCG00010832
TU128108 other downstream 595467 2070677 ~ 2073242 (+) False AMCG00010834
TU128109 other downstream 595467 2070677 ~ 2073242 (+) False AMCG00010834

Expression Profile