RNA id: TU128023


Basic Information

Item Value
RNA id TU128023
length 300
lncRNA type inter_gene
GC content 0.49
exon number 1
gene id G102518
representative True

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 1518399 ~ 1518698 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

catcgctggggagtttgttcagattgtgacgcctctctgtgtgaagaagtgtctcctgttttccgttttgaatgccttgaagcccaatttccatttgtgtccccgggtgcgtgtgtccctgctgatctggaaaagctcctctggtttgatgtggtcgatgcctttcatgattttgaagacttggatcaagtccccacgtagtctcctctgttccagggtgaaaaggttcagttcctcagtctctcagtaggacattcccttcagacctggaataagtctggttgctctcctctgaactgc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU128021 lncRNA upstream 43189 1474998 ~ 1475210 (+) True G102516
TU127905 lncRNA upstream 393216 1046402 ~ 1125183 (+) False AMCG00010809
TU127892 lncRNA upstream 552194 965961 ~ 966205 (+) True G102415
TU127871 lncRNA upstream 711175 806994 ~ 807224 (+) True G102396
TU127845 lncRNA upstream 955206 560886 ~ 563193 (+) True G102373
TU128025 lncRNA downstream 29112 1547810 ~ 1548180 (+) True G102520
TU128059 lncRNA downstream 444048 1962746 ~ 1963952 (+) False AMCG00010830
TU128134 lncRNA downstream 656098 2174796 ~ 2175064 (+) True G102611
TU128145 lncRNA downstream 733405 2252103 ~ 2252470 (+) True G102622
TU128151 lncRNA downstream 798239 2316937 ~ 2317570 (+) True G102628
AMCG00010825 mRNA upstream 58410 1458829 ~ 1459989 (+) True AMCG00010825
AMCG00010824 mRNA upstream 60670 1457490 ~ 1457729 (+) True AMCG00010824
AMCG00010823 mRNA upstream 65869 1428644 ~ 1452530 (+) True AMCG00010823
AMCG00010822 mRNA upstream 99432 1378997 ~ 1418967 (+) True AMCG00010822
AMCG00010820 mRNA upstream 149531 1362897 ~ 1368868 (+) True AMCG00010820
AMCG00010826 mRNA downstream 332086 1850784 ~ 1859425 (+) True AMCG00010826
AMCG00010830 mRNA downstream 426357 1945055 ~ 1963965 (+) True AMCG00010830
AMCG00010831 mRNA downstream 460921 1979619 ~ 1986242 (+) True AMCG00010831
AMCG00010832 mRNA downstream 520816 2039514 ~ 2064344 (+) True AMCG00010832
AMCG00010833 mRNA downstream 548967 2067665 ~ 2069500 (+) True AMCG00010833
TU128036 other downstream 271490 1790188 ~ 1791723 (+) True G102531
TU128040 other downstream 279742 1798440 ~ 1800751 (+) True G102535
TU128102 other downstream 533448 2052146 ~ 2056347 (+) False AMCG00010832
TU128108 other downstream 551979 2070677 ~ 2073242 (+) False AMCG00010834
TU128109 other downstream 551979 2070677 ~ 2073242 (+) False AMCG00010834

Expression Profile