RNA id: TU128132



Basic Information


Item Value
RNA id TU128132
length 272
lncRNA type intronic
GC content 0.35
exon number 1
gene id G102609
representative True

Chromosome Information


Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 2171530 ~ 2171801 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


NNNNNcaaacatacaaaatcagcaggggatcaaatacttttttccctcactgtatctttgTATGAATCAGTTACCCTATTGATGCTGAGGTGGTCTAACTGTACAAATGCCATGATAGACTCGCTTTGTACGTATGCAGCGCTCTTCTGTAGACTCGATTACCATGTATGGTTACATACTGCTTTCTTAATACACAACTTTGAGACATGCTGTATTAGTATTTAAAGTAACATCATGTTGAGTacgaaataaaaatgaaaaatgaacacaca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU128080 lncRNA downstream 207577 1962282 ~ 1963953 (-) True G102572
TU128070 lncRNA downstream 258577 1857460 ~ 1912953 (-) True G102562
TU128049 lncRNA downstream 363442 1807629 ~ 1808088 (-) True G102543
TU128030 lncRNA downstream 503246 1668038 ~ 1668284 (-) True G102525
TU128026 lncRNA downstream 623435 1547816 ~ 1548095 (-) True G102521
TU128138 lncRNA upstream 5475 2177276 ~ 2177516 (-) True G102615
TU128146 lncRNA upstream 80318 2252119 ~ 2252467 (-) True G102623
TU128152 lncRNA upstream 144964 2316765 ~ 2317264 (-) True G102629
TU128166 lncRNA upstream 191079 2362880 ~ 2363110 (-) True G102639
TU128189 lncRNA upstream 214922 2386723 ~ 2437698 (-) True G102651
AMCG00010827 mRNA downstream 334645 1821651 ~ 1836885 (-) True AMCG00010827
AMCG00010829 mRNA downstream 370770 1798219 ~ 1800760 (-) True AMCG00010829
AMCG00010828 mRNA downstream 374938 1792777 ~ 1796592 (-) True AMCG00010828
AMCG00010817 mRNA downstream 928880 1222087 ~ 1242650 (-) True AMCG00010817
AMCG00010818 mRNA downstream 952204 1214405 ~ 1219326 (-) True AMCG00010818
AMCG00010835 mRNA upstream 8703 2180504 ~ 2182472 (-) True AMCG00010835
AMCG00010840 mRNA upstream 160415 2332216 ~ 2336743 (-) True AMCG00010840
AMCG00010839 mRNA upstream 193672 2365473 ~ 2382245 (-) True AMCG00010839
AMCG00010841 mRNA upstream 270426 2442227 ~ 2449554 (-) True AMCG00010841
AMCG00010843 mRNA upstream 310073 2481874 ~ 2496446 (-) False AMCG00010843
TU127939 other downstream 1136656 1033921 ~ 1034874 (-) True AMCG00010806
TU127921 other downstream 1193403 975553 ~ 978127 (-) True G102434
TU127810 other downstream 2021701 145945 ~ 149829 (-) False AMCG00010794
TU128333 other upstream 568015 2739816 ~ 2778023 (-) True G102762
TU128350 other upstream 586677 2758478 ~ 2761264 (-) True G102774
TU128533 other upstream 1008169 3179970 ~ 3182619 (-) True G102902
TU128662 other upstream 1149012 3320813 ~ 3419176 (-) False G102990
TU128675 other upstream 1154057 3325858 ~ 3327559 (-) False AMCG00010895

Expression Profile