RNA id: TU128853


Basic Information

Item Value
RNA id TU128853
length 219
lncRNA type inter_gene
GC content 0.54
exon number 1
gene id G103149
representative True

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 4425354 ~ 4425572 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

taaaggtgatcactcagagtaactttgtcatgatttgcagtgacccttccctctaaggggacaagtggacccaaaccatgccaggaaaatgccccctacagcataacagagcctccggaccccctcactgtaggggtccagcagtcaggcctgtcccgttctcttggtggcccacacatgcactcgcccacttgtccagaatatggtgaaggatgactc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU128794 lncRNA downstream 272606 4152518 ~ 4152748 (-) True G103095
TU128793 lncRNA downstream 274437 4150499 ~ 4150917 (-) True G103094
TU128784 lncRNA downstream 285717 4138620 ~ 4139637 (-) True G103087
TU128741 lncRNA downstream 640723 3784257 ~ 3784631 (-) True G103050
TU128714 lncRNA downstream 865961 3554183 ~ 3559393 (-) False AMCG00010901
TU128989 lncRNA upstream 690143 5115715 ~ 5129141 (-) True AMCG00010937
TU128990 lncRNA upstream 690143 5115715 ~ 5124287 (-) False AMCG00010937
TU129052 lncRNA upstream 858758 5284330 ~ 5291900 (-) True AMCG00010946
TU129054 lncRNA upstream 906160 5331732 ~ 5334257 (-) True G103309
TU129082 lncRNA upstream 934403 5359975 ~ 5378226 (-) True G103329
AMCG00010917 mRNA downstream 134171 4290056 ~ 4291183 (-) True AMCG00010917
AMCG00010914 mRNA downstream 258317 4155031 ~ 4167037 (-) True AMCG00010914
AMCG00010910 mRNA downstream 366625 4028802 ~ 4058729 (-) True AMCG00010910
AMCG00010909 mRNA downstream 404433 4015598 ~ 4020921 (-) True AMCG00010909
AMCG00010904 mRNA downstream 813809 3592656 ~ 3611545 (-) True AMCG00010904
AMCG00010919 mRNA upstream 131981 4557553 ~ 4569654 (-) True AMCG00010919
AMCG00010921 mRNA upstream 148744 4574316 ~ 4575551 (-) True AMCG00010921
AMCG00010920 mRNA upstream 155279 4580851 ~ 4589405 (-) True AMCG00010920
AMCG00010924 mRNA upstream 167330 4592902 ~ 4604694 (-) True AMCG00010924
AMCG00010923 mRNA upstream 191859 4617431 ~ 4618522 (-) True AMCG00010923
TU128814 other downstream 239380 4169793 ~ 4185974 (-) True G103112
TU128662 other downstream 1006178 3320813 ~ 3419176 (-) False G102990
TU128666 other downstream 1006178 3416368 ~ 3419176 (-) True G102990
TU128675 other downstream 1097795 3325858 ~ 3327559 (-) False AMCG00010895
TU128533 other downstream 1242735 3179970 ~ 3182619 (-) True G102902
TU128916 other upstream 217080 4642652 ~ 4650106 (-) True AMCG00010925
TU128994 other upstream 708638 5134210 ~ 5140456 (-) False AMCG00010939
TU129184 other upstream 1279198 5704770 ~ 5748564 (-) True G103395
TU129762 other upstream 3546052 7971624 ~ 8019522 (-) False G103832
TU129989 other upstream 4393979 8819551 ~ 8863666 (-) False AMCG00011051

Expression Profile