RNA id: TU129516


Basic Information

Item Value
RNA id TU129516
length 294
lncRNA type sense_over
GC content 0.30
exon number 2
gene id G103645
representative True

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 7115984 ~ 7171805 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

tTTTGGAATTAGAATATATTATGGGGAAATATGAAAGGCCTATGacttcaatataaaacaaagtcaCATAGGAAAGACAAATATTACTTGCTGGAGAGAAAGTCCATTAATGTAGGGAAACCAAAAATATATGTGGACTTCAATCTATTACTGTTGACACAATTAGTGCTTTATAAGGGTACACGGTAATAAAAAGGCCGATATTTCCTCGAATCTCGATTCCACTTGCAACATctacatatataattttaaatgtgtccatgctgtttttttttttttttttttttttttttt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU129387 lncRNA downstream 353845 6755293 ~ 6762139 (-) True G103556
TU129388 lncRNA downstream 353845 6760139 ~ 6762139 (-) False G103556
TU129375 lncRNA downstream 487207 6628570 ~ 6628777 (-) False AMCG00010988
TU129370 lncRNA downstream 488532 6624081 ~ 6627452 (-) True G103539
TU129331 lncRNA downstream 601861 6513863 ~ 6514123 (-) True G103503
TU129531 lncRNA upstream 17280 7189085 ~ 7189583 (-) True G103658
TU129532 lncRNA upstream 17280 7189085 ~ 7189583 (-) False G103658
TU129541 lncRNA upstream 59149 7230954 ~ 7233314 (-) True G103666
TU129712 lncRNA upstream 605203 7777008 ~ 7779941 (-) True G103794
TU129760 lncRNA upstream 766332 7938137 ~ 8027031 (-) False G103832
AMCG00010992 mRNA downstream 177758 6925770 ~ 6938226 (-) True AMCG00010992
AMCG00010987 mRNA downstream 340478 6764826 ~ 6775506 (-) True AMCG00010987
AMCG00010988 mRNA downstream 471261 6628644 ~ 6644723 (-) True AMCG00010988
AMCG00010985 mRNA downstream 503232 6594655 ~ 6612752 (-) True AMCG00010985
AMCG00010982 mRNA downstream 555060 6556648 ~ 6560924 (-) True AMCG00010982
AMCG00011003 mRNA upstream 136834 7308639 ~ 7309421 (-) True AMCG00011003
AMCG00011006 mRNA upstream 193437 7365242 ~ 7390566 (-) True AMCG00011006
AMCG00011005 mRNA upstream 221167 7392972 ~ 7408696 (-) True AMCG00011005
AMCG00011009 mRNA upstream 279264 7451069 ~ 7507166 (-) True AMCG00011009
AMCG00011008 mRNA upstream 357652 7529457 ~ 7551615 (-) True AMCG00011008
TU129184 other downstream 1367420 5704770 ~ 5748564 (-) True G103395
TU128994 other downstream 1975528 5134210 ~ 5140456 (-) False AMCG00010939
TU128916 other downstream 2465878 4642652 ~ 4650106 (-) True AMCG00010925
TU128814 other downstream 2930010 4169793 ~ 4185974 (-) True G103112
TU128666 other downstream 3696808 3416368 ~ 3419176 (-) True G102990
TU129762 other upstream 799819 7971624 ~ 8019522 (-) False G103832
TU129989 other upstream 1647746 8819551 ~ 8863666 (-) False AMCG00011051
TU129988 other upstream 1683100 8854905 ~ 8863666 (-) False AMCG00011051
TU130111 other upstream 2062606 9234411 ~ 9236193 (-) False AMCG00011058
TU130252 other upstream 2430079 9601884 ~ 9602741 (-) False AMCG00011084

Expression Profile