RNA id: TU129571



Basic Information


Item Value
RNA id TU129571
length 440
lncRNA type inter_gene
GC content 0.31
exon number 2
gene id G103688
representative True

Chromosome Information


Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 7390002 ~ 7452292 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


aataataataataataagtcaaataTGGTGTTGTGgtctgtattcctacaatgaaTTAAGCTGTCAGTCTTTTAAGGTGCATGTTAAAAACTGCGTGAGAGACTCATTTCAAAAGTACAATGTAACACTGTTGCACCATAATCGCAAGTGAAGAAGATgtgaataaacattttcattttttttttctcttgcttgTTTCCAGAGTTAATTATTTCTTCGATGAAGTCATTGCTGttatgttttcttccttttttttcatgtgtatattttgtttgtcttgtttttatttctattaatcTAAAAAGCAGTCAATCTTTATTTGGCACAGTTCTCGTTCTAAGCTGTGCTGTGGTCATTAAGTCTGTCCATCCAGTGGTGAACATCTCCAATCATCTCCTTCTCAGAGGacttctaaaaaataaaagaaacaaataataaat

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU129564 lncRNA upstream 5275 7373675 ~ 7384727 (+) True G103684
TU129549 lncRNA upstream 80393 7308605 ~ 7309609 (+) True G103670
TU129466 lncRNA upstream 286813 7071433 ~ 7103189 (+) False AMCG00010994
TU129446 lncRNA upstream 427811 6961986 ~ 6962191 (+) True G103599
TU129412 lncRNA upstream 462755 6907102 ~ 6927247 (+) True G103567
TU129582 lncRNA downstream 4469 7456761 ~ 7461153 (+) True G103698
TU129673 lncRNA downstream 172161 7624453 ~ 7627917 (+) True G103761
TU129716 lncRNA downstream 397502 7849794 ~ 7850029 (+) True G103797
TU129719 lncRNA downstream 532792 7985084 ~ 7987913 (+) True G103800
TU129747 lncRNA downstream 580437 8032729 ~ 8034693 (+) True G103823
AMCG00011004 mRNA upstream 94126 7291271 ~ 7295876 (+) True AMCG00011004
AMCG00011002 mRNA upstream 103731 7271184 ~ 7286271 (+) True AMCG00011002
AMCG00010999 mRNA upstream 159301 7229370 ~ 7230701 (+) True AMCG00010999
AMCG00011000 mRNA upstream 186110 7202978 ~ 7203892 (+) True AMCG00011000
AMCG00011001 mRNA upstream 190686 7190221 ~ 7199316 (+) True AMCG00011001
AMCG00011007 mRNA downstream 102784 7555076 ~ 7559008 (+) True AMCG00011007
AMCG00011011 mRNA downstream 133974 7586266 ~ 7604072 (+) True AMCG00011011
AMCG00011010 mRNA downstream 158986 7611278 ~ 7618265 (+) True AMCG00011010
AMCG00011014 mRNA downstream 313987 7766279 ~ 7767019 (+) True AMCG00011014
AMCG00011015 mRNA downstream 316726 7769018 ~ 7778092 (+) True AMCG00011015
TU129402 other upstream 469071 6917766 ~ 6920931 (+) False AMCG00010990
TU129373 other upstream 747374 6641983 ~ 6642628 (+) True G103542
TU128904 other upstream 2747644 4638432 ~ 4642358 (+) False AMCG00010922
TU128774 other upstream 3306416 4049938 ~ 4083586 (+) True G103078
TU128716 other upstream 3809725 3577235 ~ 3580277 (+) True G103030
TU129898 other downstream 1096071 8548363 ~ 8552605 (+) True G103939
TU130204 other downstream 2078182 9530474 ~ 9533414 (+) False AMCG00011076
TU130349 other downstream 3366396 10818688 ~ 10819423 (+) True G104273
TU130500 other downstream 4213906 11666198 ~ 11671340 (+) True G104382
TU130563 other downstream 4356554 11808846 ~ 11810696 (+) False AMCG00011115

Expression Profile