RNA id: TU129800



Basic Information


Item Value
RNA id TU129800
length 203
lncRNA type inter_gene
GC content 0.62
exon number 1
gene id G103859
representative True

Chromosome Information


Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 8056481 ~ 8056683 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ACTGTGCACCTTGGACACCCCGTAGATGGTGCGGGGCCTCTGGATACACAGGTCCGGGGCAGGGTCACGTGGGGAGGTGGGACCAAAGGCGCCTATGGTGCTGGGCACGAACAACCTGAGGGAGTGCTCCAGAGACAGGTCTAGGACATTGTGAAGCCCTGCGGAGAGAGACGGTTTGGACAGGAGGTTTGGGAGAGTGGGCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU129760 lncRNA downstream 29450 7938137 ~ 8027031 (-) False G103832
TU129758 lncRNA downstream 81234 7970951 ~ 7975247 (-) True G103832
TU129712 lncRNA downstream 276540 7777008 ~ 7779941 (-) True G103794
TU129541 lncRNA downstream 823167 7230954 ~ 7233314 (-) True G103666
TU129531 lncRNA downstream 866898 7189085 ~ 7189583 (-) True G103658
TU129839 lncRNA upstream 111012 8167695 ~ 8167924 (-) True G103893
TU129846 lncRNA upstream 284680 8341363 ~ 8341588 (-) True G103900
TU129849 lncRNA upstream 285901 8342584 ~ 8342818 (-) True G103903
TU129887 lncRNA upstream 404247 8460930 ~ 8462662 (-) True G103929
TU129971 lncRNA upstream 749787 8806470 ~ 8811022 (-) True G103999
AMCG00011021 mRNA downstream 19225 8031177 ~ 8037256 (-) True AMCG00011021
AMCG00011023 mRNA downstream 29993 7997538 ~ 8026488 (-) True AMCG00011023
AMCG00011022 mRNA downstream 61862 7985281 ~ 7994619 (-) True AMCG00011022
AMCG00011013 mRNA downstream 313915 7733423 ~ 7742566 (-) True AMCG00011013
AMCG00011012 mRNA downstream 409469 7632065 ~ 7647012 (-) True AMCG00011012
AMCG00011029 mRNA upstream 4760 8061443 ~ 8065757 (-) True AMCG00011029
AMCG00011028 mRNA upstream 14163 8070846 ~ 8077484 (-) True AMCG00011028
AMCG00011026 mRNA upstream 21695 8078378 ~ 8080975 (-) True AMCG00011026
AMCG00011024 mRNA upstream 25735 8082418 ~ 8090075 (-) True AMCG00011024
AMCG00011025 mRNA upstream 34278 8090961 ~ 8099615 (-) True AMCG00011025
TU129762 other downstream 36959 7971624 ~ 8019522 (-) False G103832
TU129184 other downstream 2307917 5704770 ~ 5748564 (-) True G103395
TU128994 other downstream 2916025 5134210 ~ 5140456 (-) False AMCG00010939
TU128916 other downstream 3406375 4642652 ~ 4650106 (-) True AMCG00010925
TU128814 other downstream 3870507 4169793 ~ 4185974 (-) True G103112
TU129989 other upstream 762868 8819551 ~ 8863666 (-) False AMCG00011051
TU129988 other upstream 798222 8854905 ~ 8863666 (-) False AMCG00011051
TU130111 other upstream 1177728 9234411 ~ 9236193 (-) False AMCG00011058
TU130252 other upstream 1545201 9601884 ~ 9602741 (-) False AMCG00011084
TU130270 other upstream 1684450 9741133 ~ 9743785 (-) True AMCG00011086

Expression Profile