RNA id: TU130052


Basic Information

Item Value
RNA id TU130052
length 208
lncRNA type inter_gene
GC content 0.37
exon number 1
gene id G104055
representative True

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 8965372 ~ 8965579 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

tttatttataatatgaagCCAATGGTTTTTTAAGAAGGCTTGGCTTAGATTTTCAGTTTGAGCAGGAGTAACAAGTTACATATTCATCCGATCCTAGAAATCTCAGTTTTTGTTAATTGGCTAGAAGTGAAGTGAGAAAAGACTTGTGAGCCGAGAAACCAAGTTTAGTGAGGTGATTTAATTCCACTGCACTCTCATTCCATGCggt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU130051 lncRNA downstream 91 8964717 ~ 8965281 (-) True G104054
TU129987 lncRNA downstream 115411 8845964 ~ 8849961 (-) False AMCG00011051
TU129971 lncRNA downstream 154350 8806470 ~ 8811022 (-) True G103999
TU129887 lncRNA downstream 502710 8460930 ~ 8462662 (-) True G103929
TU129849 lncRNA downstream 622554 8342584 ~ 8342818 (-) True G103903
TU130116 lncRNA upstream 272212 9237791 ~ 9265487 (-) True G104098
TU130156 lncRNA upstream 445010 9410589 ~ 9412922 (-) True G104126
TU130348 lncRNA upstream 1758011 10723590 ~ 10723956 (-) True G104272
TU130354 lncRNA upstream 1980422 10946001 ~ 10946274 (-) True G104278
TU130406 lncRNA upstream 2450611 11416190 ~ 11420103 (-) True G104315
AMCG00011052 mRNA downstream 12623 8941116 ~ 8952749 (-) True AMCG00011052
AMCG00011050 mRNA downstream 34774 8913441 ~ 8930598 (-) True AMCG00011050
AMCG00011049 mRNA downstream 78667 8866341 ~ 8886705 (-) True AMCG00011049
AMCG00011051 mRNA downstream 101321 8843189 ~ 8864051 (-) True AMCG00011051
AMCG00011046 mRNA downstream 229789 8721384 ~ 8735583 (-) True AMCG00011046
AMCG00011054 mRNA upstream 238 8965817 ~ 8970772 (-) True AMCG00011054
AMCG00011057 mRNA upstream 222131 9187710 ~ 9200667 (-) True AMCG00011057
AMCG00011058 mRNA upstream 256689 9222268 ~ 9236228 (-) True AMCG00011058
AMCG00011059 mRNA upstream 273782 9239361 ~ 9249868 (-) True AMCG00011059
AMCG00011060 mRNA upstream 288554 9254133 ~ 9260814 (-) True AMCG00011060
TU129989 other downstream 101706 8819551 ~ 8863666 (-) False AMCG00011051
TU129988 other downstream 101706 8854905 ~ 8863666 (-) False AMCG00011051
TU129762 other downstream 945850 7971624 ~ 8019522 (-) False G103832
TU129184 other downstream 3216808 5704770 ~ 5748564 (-) True G103395
TU128994 other downstream 3824916 5134210 ~ 5140456 (-) False AMCG00010939
TU130111 other upstream 268832 9234411 ~ 9236193 (-) False AMCG00011058
TU130252 other upstream 636305 9601884 ~ 9602741 (-) False AMCG00011084
TU130270 other upstream 775554 9741133 ~ 9743785 (-) True AMCG00011086
TU130712 other upstream 3029834 11995413 ~ 11997786 (-) False AMCG00011140
TU130749 other upstream 3101886 12067465 ~ 12069079 (-) False AMCG00011135

Expression Profile