RNA id: TU130718



Basic Information


Item Value
RNA id TU130718
length 208
lncRNA type inter_gene
GC content 0.54
exon number 1
gene id G104545
representative True

Chromosome Information


Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 12039169 ~ 12039376 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


tgatagaaaggtgtcagaacacacagtgcatcgcagtttgttgcgtatggggctgcgtagccgcagaccagtcagggtgcctatgctgacccctgtccactgccgaaagcgcctacaatgggcacgtgagcatcagaactggaccacggagcaatgaaAGAAgttggcctggtctgatgaatcacgagttcaaggtgttgacttggcc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU130711 lncRNA downstream 44830 11990829 ~ 11994339 (-) True AMCG00011140
TU130682 lncRNA downstream 60881 11977351 ~ 11978288 (-) True G104513
TU130673 lncRNA downstream 68167 11959238 ~ 11971002 (-) True AMCG00011125
TU130580 lncRNA downstream 342110 11663592 ~ 11697059 (-) True G104449
TU130492 lncRNA downstream 382336 11649005 ~ 11656833 (-) True G104376
TU130755 lncRNA upstream 37352 12076728 ~ 12144122 (-) True G104568
TU130781 lncRNA upstream 96592 12135968 ~ 12142015 (-) True G104591
TU130789 lncRNA upstream 117066 12156442 ~ 12156731 (-) True G104598
TU130874 lncRNA upstream 335691 12375067 ~ 12379667 (-) True G104660
TU130881 lncRNA upstream 362988 12402364 ~ 12402564 (-) True G104665
AMCG00011137 mRNA downstream 5770 12015153 ~ 12033399 (-) True AMCG00011137
AMCG00011138 mRNA downstream 30216 12004096 ~ 12008953 (-) True AMCG00011138
AMCG00011140 mRNA downstream 43235 11992239 ~ 11995934 (-) False AMCG00011140
AMCG00011129 mRNA downstream 54361 11978953 ~ 11984808 (-) True AMCG00011129
AMCG00011125 mRNA downstream 68934 11967369 ~ 11970235 (-) False AMCG00011125
AMCG00011139 mRNA upstream 14262 12053638 ~ 12059625 (-) True AMCG00011139
AMCG00011135 mRNA upstream 27119 12066495 ~ 12069075 (-) True AMCG00011135
AMCG00011136 mRNA upstream 32291 12071667 ~ 12085428 (-) True AMCG00011136
AMCG00011150 mRNA upstream 226131 12265507 ~ 12275549 (-) True AMCG00011150
AMCG00011149 mRNA upstream 261409 12300785 ~ 12306207 (-) True AMCG00011149
TU130712 other downstream 41383 11995413 ~ 11997786 (-) False AMCG00011140
TU130270 other downstream 2295384 9741133 ~ 9743785 (-) True AMCG00011086
TU130252 other downstream 2436428 9601884 ~ 9602741 (-) False AMCG00011084
TU130111 other downstream 2802976 9234411 ~ 9236193 (-) False AMCG00011058
TU129989 other downstream 3175503 8819551 ~ 8863666 (-) False AMCG00011051
TU130749 other upstream 28089 12067465 ~ 12069079 (-) False AMCG00011135
TU130831 other upstream 286721 12326097 ~ 12328282 (-) True G104629
TU130897 other upstream 396495 12435871 ~ 12457327 (-) True AMCG00011152
TU130955 other upstream 508913 12548289 ~ 12548993 (-) True G104715
TU130995 other upstream 595480 12634856 ~ 12640227 (-) True G104749

Expression Profile