RNA id: TU131209



Basic Information


Item Value
RNA id TU131209
length 243
lncRNA type inter_gene
GC content 0.64
exon number 1
gene id G104916
representative True

Chromosome Information


Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 13378057 ~ 13378299 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CTTTTCCACGAAGCCCAAGAAAGAGGTCCTCTCGATCTCCACCGGCTGCCCTTGCCGGTCGTACAGCGCCAGGACGAAGTGGAAGAAGTTGGACTTGCGCAGGTTGGACGGCGGCTGCTTCTCGAAGTGCGCCCGGGCCAGCCCGACTCCGCTGcggacacacagcacacaccgCACTGcaacactgagcacactgcacACCGCACACCGCGCACCGCGCACGGTATACCGCGGCCATTCCTC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU131208 lncRNA downstream 1060 13376133 ~ 13376997 (-) True G104915
TU131117 lncRNA downstream 437897 12935482 ~ 12940160 (-) True G104846
TU131116 lncRNA downstream 446974 12928672 ~ 12931083 (-) True G104845
TU131049 lncRNA downstream 552566 12821073 ~ 12825491 (-) False AMCG00011169
TU131026 lncRNA downstream 614390 12761045 ~ 12763667 (-) True G104776
TU131214 lncRNA upstream 175141 13553440 ~ 13555074 (-) True G104921
TU131241 lncRNA upstream 283887 13662186 ~ 13667716 (-) True G104928
TU131246 lncRNA upstream 287496 13665795 ~ 13679262 (-) False G104929
TU131342 lncRNA upstream 486222 13864521 ~ 13867615 (-) True G104998
TU131407 lncRNA upstream 687042 14065341 ~ 14065908 (-) True G105048
AMCG00011188 mRNA downstream 34593 13328493 ~ 13343464 (-) True AMCG00011188
AMCG00011183 mRNA downstream 185917 13186948 ~ 13192140 (-) True AMCG00011183
AMCG00011182 mRNA downstream 273502 13056733 ~ 13104555 (-) True AMCG00011182
AMCG00011179 mRNA downstream 343938 13019906 ~ 13034119 (-) True AMCG00011179
AMCG00011180 mRNA downstream 364706 13004538 ~ 13013351 (-) True AMCG00011180
AMCG00011194 mRNA upstream 306335 13684634 ~ 13687704 (-) True AMCG00011194
AMCG00011200 mRNA upstream 365619 13743918 ~ 13745225 (-) True AMCG00011200
AMCG00011198 mRNA upstream 374254 13752553 ~ 13778757 (-) True AMCG00011198
AMCG00011203 mRNA upstream 478558 13856857 ~ 13858270 (-) True AMCG00011203
AMCG00011208 mRNA upstream 541369 13919668 ~ 13922667 (-) True AMCG00011208
TU131202 other downstream 10983 13365083 ~ 13367074 (-) True G104909
TU131118 other downstream 433916 12943141 ~ 12944141 (-) False AMCG00011174
TU131119 other downstream 434975 12942391 ~ 12943082 (-) False AMCG00011174
TU130995 other downstream 737830 12634856 ~ 12640227 (-) True G104749
TU130955 other downstream 829064 12548289 ~ 12548993 (-) True G104715
TU131247 other upstream 297832 13676131 ~ 13679262 (-) True G104929
TU131382 other upstream 617901 13996200 ~ 13996589 (-) True AMCG00011211
TU131409 other upstream 688916 14067215 ~ 14068561 (-) True G105050
TU131692 other upstream 1992103 15370402 ~ 15373179 (-) True G105290
TU131737 other upstream 2121235 15499534 ~ 15502133 (-) True AMCG00011251

Expression Profile