RNA id: TU131467


Basic Information

Item Value
RNA id TU131467
length 353
lncRNA type inter_gene
GC content 0.59
exon number 1
gene id G105105
representative True

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 14419701 ~ 14420053 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATCTCCTTCCCCCCCGTAGTTTTGATGTCAATGCCGGAGTGCCCCTCTTCGTGCCCCCCAGTCCCCTTGTCTGTACAAATGCTGCCCGGCTCGCTATCGGTGCTCCTGCCGTCTTGGGATCCGTCCTGGATACTCTTCGGGCTCCTGGCACTTCTTTGCCCGACGCTCAGGGCATCGAAATCGATGGTTTTGCTCTCGTAGGCTCCTTCCACATTGCAAAACATGCCCCCGTATTTTTGCCGGGGGACCTGGTCTGTGGTCCCCGGCCTGGCCAGGTACACCGGCAGGTCATCTTCCTTGTCCCACGTCCGCTTGCGTTCAGCCATGATCCCCAAATGCGAGAGGAGTGTGGA

Function

GO:

id name namespace
GO:0002011 morphogenesis of an epithelial sheet biological_process
GO:0055113 epiboly involved in gastrulation with mouth forming second biological_process
GO:0090504 epiboly biological_process
GO:0001702 gastrulation with mouth forming second biological_process

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU131442 lncRNA downstream 157791 14218955 ~ 14261910 (-) True G105080
TU131436 lncRNA downstream 216165 14198827 ~ 14203536 (-) True G105077
TU131411 lncRNA downstream 348732 14070404 ~ 14070969 (-) True G105052
TU131407 lncRNA downstream 353793 14065341 ~ 14065908 (-) True G105048
TU131342 lncRNA downstream 552086 13864521 ~ 13867615 (-) True G104998
TU131470 lncRNA upstream 7366 14427419 ~ 14434667 (-) True G105107
TU131475 lncRNA upstream 27285 14447338 ~ 14449781 (-) True G105112
TU131557 lncRNA upstream 469173 14889226 ~ 14889437 (-) True G105176
TU131570 lncRNA upstream 508748 14928801 ~ 14929049 (-) True G105187
TU131596 lncRNA upstream 634363 15054416 ~ 15054817 (-) True G105213
AMCG00011216 mRNA downstream 78961 14211625 ~ 14340740 (-) True AMCG00011216
AMCG00011211 mRNA downstream 423351 13993983 ~ 13996350 (-) False AMCG00011211
AMCG00011207 mRNA downstream 473153 13939359 ~ 13946548 (-) True AMCG00011207
AMCG00011208 mRNA downstream 497034 13919668 ~ 13922667 (-) True AMCG00011208
AMCG00011203 mRNA downstream 561431 13856857 ~ 13858270 (-) True AMCG00011203
AMCG00011222 mRNA upstream 45104 14465157 ~ 14467077 (-) True AMCG00011222
AMCG00011223 mRNA upstream 62317 14482370 ~ 14489581 (-) True AMCG00011223
AMCG00011230 mRNA upstream 126018 14546071 ~ 14576028 (-) True AMCG00011230
AMCG00011231 mRNA upstream 229325 14649378 ~ 14676424 (-) True AMCG00011231
AMCG00011229 mRNA upstream 268126 14688179 ~ 14701429 (-) True AMCG00011229
TU131409 other downstream 351140 14067215 ~ 14068561 (-) True G105050
TU131382 other downstream 423112 13996200 ~ 13996589 (-) True AMCG00011211
TU131247 other downstream 740439 13676131 ~ 13679262 (-) True G104929
TU131202 other downstream 1052627 13365083 ~ 13367074 (-) True G104909
TU131118 other downstream 1475560 12943141 ~ 12944141 (-) False AMCG00011174
TU131692 other upstream 950349 15370402 ~ 15373179 (-) True G105290
TU131737 other upstream 1079481 15499534 ~ 15502133 (-) True AMCG00011251
TU131862 other upstream 1543285 15963338 ~ 15973872 (-) False AMCG00011259
TU131861 other upstream 1543399 15963452 ~ 15973872 (-) False AMCG00011259
TU132119 other upstream 2538128 16958181 ~ 16961069 (-) False AMCG00011290

Expression Profile