RNA id: TU131470


Basic Information

Item Value
RNA id TU131470
length 383
lncRNA type inter_gene
GC content 0.56
exon number 2
gene id G105107
representative True

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 14427419 ~ 14434667 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATCTTCCATGTAAATGTCCGCATAAAAAGACTGGTCATCATTTACGATCCTTCCTCCCCCTTGGGATATTCTTCTTGCCTTGGTAAGACATGTTTGCTGACGAGCACCCAAAAGCAACGCGGATAGGCGATGTGGATCTCTCTCTTTTCTGTCCTGGACGATGCTTTGCTGCTGGTGCGTGGATGGGAAATAAGGGAATGGTCGTCTTCCTTTCCTGCGCGATAGTAAATCCCCCCTCGCAGCGAGCCTGAGCGTCTATCCTCCACAACACCGCGCCTGAGCGCCCGGGCTCCTCCCTCGCCAGCCTGGGGTCGAGCTCTGCGccgctccgccaatgggatcggagagattctgcagatctgcgcacgACTGCGACAATCTGC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU131467 lncRNA downstream 7366 14419701 ~ 14420053 (-) True G105105
TU131442 lncRNA downstream 165509 14218955 ~ 14261910 (-) True G105080
TU131436 lncRNA downstream 223883 14198827 ~ 14203536 (-) True G105077
TU131411 lncRNA downstream 356450 14070404 ~ 14070969 (-) True G105052
TU131407 lncRNA downstream 361511 14065341 ~ 14065908 (-) True G105048
TU131475 lncRNA upstream 12671 14447338 ~ 14449781 (-) True G105112
TU131557 lncRNA upstream 454559 14889226 ~ 14889437 (-) True G105176
TU131570 lncRNA upstream 494134 14928801 ~ 14929049 (-) True G105187
TU131596 lncRNA upstream 619749 15054416 ~ 15054817 (-) True G105213
TU131604 lncRNA upstream 684540 15119207 ~ 15119433 (-) True G105221
AMCG00011216 mRNA downstream 86679 14211625 ~ 14340740 (-) True AMCG00011216
AMCG00011211 mRNA downstream 431069 13993983 ~ 13996350 (-) False AMCG00011211
AMCG00011207 mRNA downstream 480871 13939359 ~ 13946548 (-) True AMCG00011207
AMCG00011208 mRNA downstream 504752 13919668 ~ 13922667 (-) True AMCG00011208
AMCG00011203 mRNA downstream 569149 13856857 ~ 13858270 (-) True AMCG00011203
AMCG00011222 mRNA upstream 30490 14465157 ~ 14467077 (-) True AMCG00011222
AMCG00011223 mRNA upstream 47703 14482370 ~ 14489581 (-) True AMCG00011223
AMCG00011230 mRNA upstream 111404 14546071 ~ 14576028 (-) True AMCG00011230
AMCG00011231 mRNA upstream 214711 14649378 ~ 14676424 (-) True AMCG00011231
AMCG00011229 mRNA upstream 253512 14688179 ~ 14701429 (-) True AMCG00011229
TU131409 other downstream 358858 14067215 ~ 14068561 (-) True G105050
TU131382 other downstream 430830 13996200 ~ 13996589 (-) True AMCG00011211
TU131247 other downstream 748157 13676131 ~ 13679262 (-) True G104929
TU131202 other downstream 1060345 13365083 ~ 13367074 (-) True G104909
TU131118 other downstream 1483278 12943141 ~ 12944141 (-) False AMCG00011174
TU131692 other upstream 935735 15370402 ~ 15373179 (-) True G105290
TU131737 other upstream 1064867 15499534 ~ 15502133 (-) True AMCG00011251
TU131862 other upstream 1528671 15963338 ~ 15973872 (-) False AMCG00011259
TU131861 other upstream 1528785 15963452 ~ 15973872 (-) False AMCG00011259
TU132119 other upstream 2523514 16958181 ~ 16961069 (-) False AMCG00011290

Expression Profile