RNA id: TU131569



Basic Information


Item Value
RNA id TU131569
length 298
lncRNA type inter_gene
GC content 0.47
exon number 1
gene id G105186
representative True

Chromosome Information


Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 14928643 ~ 14928940 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ggagagcggtacacaaatgagtgtctgcaggcaacagtggagcatggtggaggttccttgcaagtttggggctgcatttctgcaaatggagttggggatttggtcagaatgaatggtctcctcaatgctgagaagtacaggcagatatttatctatcatgcaataccaccagggaggcatctgattggccccacatttattctgcagcatgacaacgaccccaaacatacagcgacagtcattaagaactatcttcagtgtaaagaagaacaaggagtcctggaagtgttGGTATGGc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU131520 lncRNA upstream 257094 14671298 ~ 14671549 (+) True G105145
TU131519 lncRNA upstream 257715 14670719 ~ 14670928 (+) True G105144
TU131518 lncRNA upstream 263490 14664620 ~ 14665153 (+) True G105143
TU131476 lncRNA upstream 469625 14456102 ~ 14459018 (+) True G105113
TU131438 lncRNA upstream 666627 14218950 ~ 14262016 (+) True G105078
TU131609 lncRNA downstream 320798 15249738 ~ 15256622 (+) True G105226
TU131624 lncRNA downstream 351515 15280455 ~ 15283748 (+) True G105238
TU131713 lncRNA downstream 543319 15472259 ~ 15487372 (+) True AMCG00011250
TU131789 lncRNA downstream 892368 15821308 ~ 15839105 (+) True G105365
TU131797 lncRNA downstream 930818 15859758 ~ 15861690 (+) True G105370
AMCG00011226 mRNA upstream 22037 14896196 ~ 14906606 (+) True AMCG00011226
AMCG00011224 mRNA upstream 320060 14598190 ~ 14608583 (+) True AMCG00011224
AMCG00011221 mRNA upstream 389784 14502980 ~ 14538859 (+) True AMCG00011221
AMCG00011218 mRNA upstream 478966 14427479 ~ 14449677 (+) True AMCG00011218
AMCG00011220 mRNA upstream 502013 14419728 ~ 14426630 (+) True AMCG00011220
AMCG00011225 mRNA downstream 12821 14941761 ~ 14963439 (+) True AMCG00011225
AMCG00011227 mRNA downstream 86855 15015795 ~ 15023060 (+) True AMCG00011227
AMCG00011228 mRNA downstream 104999 15033939 ~ 15041745 (+) True AMCG00011228
AMCG00011234 mRNA downstream 302507 15231447 ~ 15233722 (+) True AMCG00011234
AMCG00011235 mRNA downstream 313299 15242239 ~ 15249288 (+) True AMCG00011235
TU131514 other upstream 308109 14619690 ~ 14620534 (+) True G105139
TU131073 other upstream 1985561 12942380 ~ 12943082 (+) True G104815
TU130962 other upstream 2309588 12610129 ~ 12619055 (+) True G104719
TU130924 other upstream 2401612 12525360 ~ 12527031 (+) True G104694
TU130727 other upstream 2861306 12066494 ~ 12067337 (+) True G104550
TU131632 other downstream 391840 15320780 ~ 15322425 (+) False AMCG00011241
TU131792 other downstream 921706 15850646 ~ 15852389 (+) True AMCG00011253
TU131793 other downstream 924824 15853764 ~ 15855784 (+) True AMCG00011252
TU131803 other downstream 1034400 15963340 ~ 15984079 (+) True G105373
TU132132 other downstream 2049552 16978492 ~ 16982241 (+) True AMCG00011293

Expression Profile