RNA id: TU131570


Basic Information

Item Value
RNA id TU131570
length 249
lncRNA type inter_gene
GC content 0.46
exon number 1
gene id G105187
representative True

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 14928801 ~ 14929049 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

tggagaactaaccacagttcttctgtggatttaggcagcctcagttgcttctctctcttcatgtaatctcagacagactcaatgatgttgagatcagggctctgtggaggCCATACCaacacttccaggactccttgttcttctttacactgaagatagttcttaatgactgtcgctgtatgtttggggtcgttgtcatgctgcagaataaatgtggggccaatcagatgcctccctggtggtattgca

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU131557 lncRNA downstream 39364 14889226 ~ 14889437 (-) True G105176
TU131475 lncRNA downstream 479020 14447338 ~ 14449781 (-) True G105112
TU131470 lncRNA downstream 494134 14427419 ~ 14434667 (-) True G105107
TU131467 lncRNA downstream 508748 14419701 ~ 14420053 (-) True G105105
TU131442 lncRNA downstream 666891 14218955 ~ 14261910 (-) True G105080
TU131596 lncRNA upstream 125367 15054416 ~ 15054817 (-) True G105213
TU131604 lncRNA upstream 190158 15119207 ~ 15119433 (-) True G105221
TU131635 lncRNA upstream 304654 15233703 ~ 15300851 (-) True G105249
TU131651 lncRNA upstream 369596 15298645 ~ 15322712 (-) True G105261
TU131695 lncRNA upstream 444298 15373347 ~ 15374763 (-) True G105291
AMCG00011233 mRNA downstream 38496 14884434 ~ 14890305 (-) True AMCG00011233
AMCG00011232 mRNA downstream 95159 14823524 ~ 14833642 (-) True AMCG00011232
AMCG00011229 mRNA downstream 227372 14688179 ~ 14701429 (-) True AMCG00011229
AMCG00011231 mRNA downstream 252377 14649378 ~ 14676424 (-) True AMCG00011231
AMCG00011230 mRNA downstream 352773 14546071 ~ 14576028 (-) True AMCG00011230
AMCG00011239 mRNA upstream 151335 15080384 ~ 15130043 (-) True AMCG00011239
AMCG00011238 mRNA upstream 306576 15235625 ~ 15238725 (-) True AMCG00011238
AMCG00011237 mRNA upstream 318143 15247192 ~ 15272628 (-) True AMCG00011237
AMCG00011245 mRNA upstream 353528 15282577 ~ 15295505 (-) True AMCG00011245
AMCG00011246 mRNA upstream 399287 15328336 ~ 15346964 (-) True AMCG00011246
TU131409 other downstream 860240 14067215 ~ 14068561 (-) True G105050
TU131382 other downstream 932212 13996200 ~ 13996589 (-) True AMCG00011211
TU131247 other downstream 1249539 13676131 ~ 13679262 (-) True G104929
TU131202 other downstream 1561727 13365083 ~ 13367074 (-) True G104909
TU131118 other downstream 1984660 12943141 ~ 12944141 (-) False AMCG00011174
TU131692 other upstream 441353 15370402 ~ 15373179 (-) True G105290
TU131737 other upstream 570485 15499534 ~ 15502133 (-) True AMCG00011251
TU131862 other upstream 1034289 15963338 ~ 15973872 (-) False AMCG00011259
TU131861 other upstream 1034403 15963452 ~ 15973872 (-) False AMCG00011259
TU132119 other upstream 2029132 16958181 ~ 16961069 (-) False AMCG00011290

Expression Profile