RNA id: TU131596


Basic Information

Item Value
RNA id TU131596
length 402
lncRNA type inter_gene
GC content 0.48
exon number 1
gene id G105213
representative True

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 15054416 ~ 15054817 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

aatagtttggaatcctgctgtgagatgtctggggaagggggcctgtaggtgataaaaactctttgaaatggacgagagccgaaatccagacacagagctacgaacccgggccaaccggcatttccaaaagatggcatggattgacatcagtcataaatcaagcccccctccaataggacactgggggctgaaactgaaatccaatctcaaaaactcaagaaccaatcacctattgatctgacagacgtATAAAGAACAGCACACgacctccttttctctctctctcacctgaaccagtaactcgctgccacagctcaacctgtagctctgttgcccgaaccggaaccagaaaccaaccaagtctttgctggcaacagaagagttaaactgggagaaggagat

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU131570 lncRNA downstream 125367 14928801 ~ 14929049 (-) True G105187
TU131557 lncRNA downstream 164979 14889226 ~ 14889437 (-) True G105176
TU131475 lncRNA downstream 604635 14447338 ~ 14449781 (-) True G105112
TU131470 lncRNA downstream 619749 14427419 ~ 14434667 (-) True G105107
TU131467 lncRNA downstream 634363 14419701 ~ 14420053 (-) True G105105
TU131604 lncRNA upstream 64390 15119207 ~ 15119433 (-) True G105221
TU131635 lncRNA upstream 178886 15233703 ~ 15300851 (-) True G105249
TU131651 lncRNA upstream 243828 15298645 ~ 15322712 (-) True G105261
TU131695 lncRNA upstream 318530 15373347 ~ 15374763 (-) True G105291
TU131679 lncRNA upstream 330899 15385716 ~ 15404233 (-) True G105282
AMCG00011233 mRNA downstream 164111 14884434 ~ 14890305 (-) True AMCG00011233
AMCG00011232 mRNA downstream 220774 14823524 ~ 14833642 (-) True AMCG00011232
AMCG00011229 mRNA downstream 352987 14688179 ~ 14701429 (-) True AMCG00011229
AMCG00011231 mRNA downstream 377992 14649378 ~ 14676424 (-) True AMCG00011231
AMCG00011230 mRNA downstream 478388 14546071 ~ 14576028 (-) True AMCG00011230
AMCG00011239 mRNA upstream 25567 15080384 ~ 15130043 (-) True AMCG00011239
AMCG00011238 mRNA upstream 180808 15235625 ~ 15238725 (-) True AMCG00011238
AMCG00011237 mRNA upstream 192375 15247192 ~ 15272628 (-) True AMCG00011237
AMCG00011245 mRNA upstream 227760 15282577 ~ 15295505 (-) True AMCG00011245
AMCG00011246 mRNA upstream 273519 15328336 ~ 15346964 (-) True AMCG00011246
TU131409 other downstream 985855 14067215 ~ 14068561 (-) True G105050
TU131382 other downstream 1057827 13996200 ~ 13996589 (-) True AMCG00011211
TU131247 other downstream 1375154 13676131 ~ 13679262 (-) True G104929
TU131202 other downstream 1687342 13365083 ~ 13367074 (-) True G104909
TU131118 other downstream 2110275 12943141 ~ 12944141 (-) False AMCG00011174
TU131692 other upstream 315585 15370402 ~ 15373179 (-) True G105290
TU131737 other upstream 444717 15499534 ~ 15502133 (-) True AMCG00011251
TU131862 other upstream 908521 15963338 ~ 15973872 (-) False AMCG00011259
TU131861 other upstream 908635 15963452 ~ 15973872 (-) False AMCG00011259
TU132119 other upstream 1903364 16958181 ~ 16961069 (-) False AMCG00011290

Expression Profile