RNA id: TU131651


Basic Information

Item Value
RNA id TU131651
length 651
lncRNA type inter_gene
GC content 0.43
exon number 3
gene id G105261
representative True

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 15298645 ~ 15322712 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CTTTACACTTTACTGttgaaaacagtttaatttttcattcaaaagaaaagctgtacattttaccttttaaaGAACGACCtacaaaacaaaccttttatACACAGTGGTTTAGACTAATTCACCTCAACTGTAATTTCCCTCACACTTGCAGAACACGATGGATGCTGAAATTGTTATTATAAAGCATCAGAACAGCCCACAGGCCAAAAGCAATTaaggtattttatgttttttggcaTGAATGGCATTTCATGTGTGTAGgatttcaataaagaaaagcaagCCCGTTCGAgaagcaatacatttatttgcattccAAACaggtcaaaaaaataaatacactgacaTGGGGTTGTGAATTGAGCTGACCGTCCTGCATTTCACTGGTCGTTCTCATAGTCGGCAGGGTTCTTCCTCTTGCCTTGCTCGTAGACATGGTTTCCCCAGGTGTAGGTCAAATACATGATCACGAAAGAGGTGCCACTTTAAAGACTTGTGAGCTGAAGCGCCTCCACACGTTGGGTATCCCCTTGGAGAAGTAGTTGGCGAAGGCTTTCTGCTCGAAGGGGGACAGGTGGTAGGTGATCACATGCCTGACCTTGGCCAGGTCTCCAAAGTGGTGGCCCATCGTCTCAAAAGGGGTGCAGGTGG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU131604 lncRNA downstream 179212 15119207 ~ 15119433 (-) True G105221
TU131596 lncRNA downstream 243828 15054416 ~ 15054817 (-) True G105213
TU131570 lncRNA downstream 369596 14928801 ~ 14929049 (-) True G105187
TU131557 lncRNA downstream 409208 14889226 ~ 14889437 (-) True G105176
TU131475 lncRNA downstream 848864 14447338 ~ 14449781 (-) True G105112
TU131695 lncRNA upstream 50635 15373347 ~ 15374763 (-) True G105291
TU131679 lncRNA upstream 63004 15385716 ~ 15404233 (-) True G105282
TU131703 lncRNA upstream 69020 15391732 ~ 15396392 (-) True G105298
TU131742 lncRNA upstream 212658 15535370 ~ 15569124 (-) True G105326
TU131866 lncRNA upstream 709539 16032251 ~ 16035023 (-) True G105427
AMCG00011245 mRNA downstream 3140 15282577 ~ 15295505 (-) True AMCG00011245
AMCG00011237 mRNA downstream 26017 15247192 ~ 15272628 (-) True AMCG00011237
AMCG00011238 mRNA downstream 59920 15235625 ~ 15238725 (-) True AMCG00011238
AMCG00011239 mRNA downstream 168602 15080384 ~ 15130043 (-) True AMCG00011239
AMCG00011233 mRNA downstream 408340 14884434 ~ 14890305 (-) True AMCG00011233
AMCG00011246 mRNA upstream 5624 15328336 ~ 15346964 (-) True AMCG00011246
AMCG00011244 mRNA upstream 38604 15361316 ~ 15364890 (-) True AMCG00011244
AMCG00011248 mRNA upstream 120478 15443190 ~ 15444125 (-) True AMCG00011248
AMCG00011251 mRNA upstream 178289 15501001 ~ 15515675 (-) False AMCG00011251
AMCG00011261 mRNA upstream 479761 15802473 ~ 15937457 (-) True AMCG00011261
TU131409 other downstream 1230084 14067215 ~ 14068561 (-) True G105050
TU131382 other downstream 1302056 13996200 ~ 13996589 (-) True AMCG00011211
TU131247 other downstream 1619383 13676131 ~ 13679262 (-) True G104929
TU131202 other downstream 1931571 13365083 ~ 13367074 (-) True G104909
TU131118 other downstream 2354504 12943141 ~ 12944141 (-) False AMCG00011174
TU131692 other upstream 47690 15370402 ~ 15373179 (-) True G105290
TU131737 other upstream 176822 15499534 ~ 15502133 (-) True AMCG00011251
TU131862 other upstream 640626 15963338 ~ 15973872 (-) False AMCG00011259
TU131861 other upstream 640740 15963452 ~ 15973872 (-) False AMCG00011259
TU132119 other upstream 1635469 16958181 ~ 16961069 (-) False AMCG00011290

Expression Profile