RNA id: TU132311


Basic Information

Item Value
RNA id TU132311
length 250
RNA type TUCP
GC content 0.54
exon number 1
gene id G105770
representative True

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 17751253 ~ 17751502 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ctggtctgatgaatcacaagttcaaggtgttgacttggcctccaaattccccagatctcaatccaatccagcatctgtgggatgtgctggacaaacaagtccgatccatggaggccccacctcgcaacttacaggacttaaaggatctgctgctgacgtcttggtgccagatcccacagcacaccttcagaggtctagtgcagtccatgcctcgacgggtcagggctgttttggcggcaaaagggggacc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU132306 lncRNA downstream 154 17745649 ~ 17751099 (-) False AMCG00011313
TU132302 lncRNA downstream 154 17747475 ~ 17751099 (-) True AMCG00011313
TU132295 lncRNA downstream 184290 17564169 ~ 17566963 (-) True G105761
TU132276 lncRNA downstream 189458 17559402 ~ 17561795 (-) True G105752
TU132277 lncRNA downstream 189458 17559402 ~ 17561795 (-) False G105752
TU132315 lncRNA upstream 2825 17754327 ~ 17755758 (-) True G105774
TU132326 lncRNA upstream 45941 17797443 ~ 17800287 (-) True G105782
TU132331 lncRNA upstream 55177 17806679 ~ 17806929 (-) True G105786
TU132332 lncRNA upstream 245936 17997438 ~ 17997725 (-) True G105787
TU132341 lncRNA upstream 281253 18032755 ~ 18033145 (-) True G105795
AMCG00011313 mRNA downstream 1604 17717626 ~ 17749649 (-) False AMCG00011313
AMCG00011303 mRNA downstream 298485 17434502 ~ 17452768 (-) True AMCG00011303
AMCG00011304 mRNA downstream 355266 17379726 ~ 17395987 (-) True AMCG00011304
AMCG00011301 mRNA downstream 408491 17312451 ~ 17342762 (-) True AMCG00011301
AMCG00011299 mRNA downstream 547723 17173697 ~ 17203530 (-) True AMCG00011299
AMCG00011311 mRNA upstream 10408 17761910 ~ 17773165 (-) True AMCG00011311
AMCG00011315 mRNA upstream 32538 17784040 ~ 17785842 (-) True AMCG00011315
AMCG00011314 mRNA upstream 35418 17786920 ~ 17793506 (-) True AMCG00011314
AMCG00011316 mRNA upstream 429144 18180646 ~ 18190597 (-) False AMCG00011316
AMCG00011318 mRNA upstream 445039 18196541 ~ 18197251 (-) True AMCG00011318
TU132307 other downstream 18185 17729951 ~ 17733068 (-) False AMCG00011313
TU132119 other downstream 790184 16958181 ~ 16961069 (-) False AMCG00011290
TU131862 other downstream 1777381 15963338 ~ 15973872 (-) False AMCG00011259
TU131861 other downstream 1777381 15963452 ~ 15973872 (-) False AMCG00011259
TU131737 other downstream 2249120 15499534 ~ 15502133 (-) True AMCG00011251
TU132338 other upstream 248166 17999668 ~ 18000445 (-) True G105793
TU132382 other upstream 432982 18184484 ~ 18191195 (-) True AMCG00011316
TU132383 other upstream 432982 18184484 ~ 18191195 (-) False AMCG00011316
TU132457 other upstream 1350791 19102293 ~ 19105269 (-) True G105890
TU132572 other upstream 1658866 19410368 ~ 19413015 (-) False G105970

Expression Profile