RNA id: TU132332



Basic Information


Item Value
RNA id TU132332
length 288
lncRNA type inter_gene
GC content 0.41
exon number 1
gene id G105787
representative True

Chromosome Information


Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 17997438 ~ 17997725 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


AATGGGTCCCTACtttctggattgtttttcaGAGGAAAATGGGGTTCGTACGGCTTATGAGTTTGCCGGTTGTATTTACCACGGTTGTCCTCAGTGCTTTGACGCAAACACTTTTAATCCTGTCACTCGTCAAATCTGTGGAGATATGCACTTTGATTTCTTACAAAGAATCGAGACTCTAAAAAACACCTATGGTTTAACTGTGAAAGTGATGTGGGAACATGAGTGGACGGCTATGAAAAAGCAGGACGGTAGTGTACGAACATTCATGAAAACCTTTGATTTTCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU132331 lncRNA downstream 190509 17806679 ~ 17806929 (-) True G105786
TU132326 lncRNA downstream 197151 17797443 ~ 17800287 (-) True G105782
TU132315 lncRNA downstream 241680 17754327 ~ 17755758 (-) True G105774
TU132306 lncRNA downstream 246339 17745649 ~ 17751099 (-) False AMCG00011313
TU132302 lncRNA downstream 246339 17747475 ~ 17751099 (-) True AMCG00011313
TU132341 lncRNA upstream 35030 18032755 ~ 18033145 (-) True G105795
TU132380 lncRNA upstream 177943 18175668 ~ 18247770 (-) True G105823
TU132399 lncRNA upstream 242951 18240676 ~ 18244145 (-) True G105840
TU132422 lncRNA upstream 619124 18616849 ~ 18617084 (-) True G105859
TU132493 lncRNA upstream 1235997 19233722 ~ 19244483 (-) True G105918
AMCG00011314 mRNA downstream 203932 17786920 ~ 17793506 (-) True AMCG00011314
AMCG00011315 mRNA downstream 211596 17784040 ~ 17785842 (-) True AMCG00011315
AMCG00011311 mRNA downstream 224273 17761910 ~ 17773165 (-) True AMCG00011311
AMCG00011313 mRNA downstream 247789 17717626 ~ 17749649 (-) False AMCG00011313
AMCG00011303 mRNA downstream 544670 17434502 ~ 17452768 (-) True AMCG00011303
AMCG00011316 mRNA upstream 182921 18180646 ~ 18190597 (-) False AMCG00011316
AMCG00011318 mRNA upstream 198816 18196541 ~ 18197251 (-) True AMCG00011318
AMCG00011317 mRNA upstream 273687 18271412 ~ 18272204 (-) True AMCG00011317
AMCG00011330 mRNA upstream 1118772 19116497 ~ 19121979 (-) True AMCG00011330
AMCG00011334 mRNA upstream 1202771 19200496 ~ 19208029 (-) True AMCG00011334
TU132311 other downstream 245936 17751253 ~ 17751502 (-) True G105770
TU132307 other downstream 264370 17729951 ~ 17733068 (-) False AMCG00011313
TU132119 other downstream 1036369 16958181 ~ 16961069 (-) False AMCG00011290
TU131862 other downstream 2023566 15963338 ~ 15973872 (-) False AMCG00011259
TU132338 other upstream 1943 17999668 ~ 18000445 (-) True G105793
TU132382 other upstream 186759 18184484 ~ 18191195 (-) True AMCG00011316
TU132383 other upstream 186759 18184484 ~ 18191195 (-) False AMCG00011316
TU132457 other upstream 1104568 19102293 ~ 19105269 (-) True G105890
TU132572 other upstream 1412643 19410368 ~ 19413015 (-) False G105970

Expression Profile