RNA id: TU132906


Basic Information

Item Value
RNA id TU132906
length 226
lncRNA type inter_gene
GC content 0.39
exon number 1
gene id G106212
representative True

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 20217251 ~ 20217476 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

TGAAGGATAATGGACAACCCTCTCATTCATCATCATGCTCTGtacatttaatcatttctgATAATTTGGCTGAAGTACCAGAACTGAAAGACATGTCCACCTATCAGGAgaacaattcaaaattaacagtgTATTTGATCATTTCCTTGGCAGCAGTTaccttattttttctctgttttattgCTGTAATCCTCGCACTGAGGTTTTGCCGGCGAGGAAAGCCTAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU132867 lncRNA downstream 101383 20071482 ~ 20115868 (-) True G106183
TU132870 lncRNA downstream 105041 20071482 ~ 20112210 (-) False G106183
TU132869 lncRNA downstream 122009 20071482 ~ 20095242 (-) False G106183
TU132868 lncRNA downstream 130487 20071482 ~ 20086764 (-) False G106183
TU132842 lncRNA downstream 202977 19941029 ~ 20014274 (-) True G106163
TU132920 lncRNA upstream 54587 20272063 ~ 20276305 (-) True G106224
TU132972 lncRNA upstream 268795 20486271 ~ 20488188 (-) True G106266
TU132985 lncRNA upstream 397962 20615438 ~ 20615642 (-) True G106278
TU133011 lncRNA upstream 694443 20911919 ~ 20912138 (-) True G106300
TU133063 lncRNA upstream 734284 20951760 ~ 20952855 (-) True G106340
AMCG00011362 mRNA downstream 304346 19909942 ~ 19912905 (-) True AMCG00011362
AMCG00011356 mRNA downstream 349438 19866119 ~ 19867813 (-) False AMCG00011356
AMCG00011354 mRNA downstream 393099 19817467 ~ 19824152 (-) True AMCG00011354
AMCG00011357 mRNA downstream 458208 19730492 ~ 19759043 (-) True AMCG00011357
AMCG00011355 mRNA downstream 490886 19721154 ~ 19726365 (-) True AMCG00011355
AMCG00011366 mRNA upstream 159466 20376942 ~ 20384649 (-) True AMCG00011366
AMCG00011367 mRNA upstream 168688 20386164 ~ 20390745 (-) True AMCG00011367
AMCG00011369 mRNA upstream 216982 20434458 ~ 20438919 (-) True AMCG00011369
AMCG00011368 mRNA upstream 222998 20440474 ~ 20477081 (-) True AMCG00011368
AMCG00011370 mRNA upstream 281646 20499122 ~ 20544751 (-) True AMCG00011370
TU132729 other downstream 349349 19865614 ~ 19867902 (-) True AMCG00011356
TU132572 other downstream 804236 19410368 ~ 19413015 (-) False G105970
TU132457 other downstream 1111982 19102293 ~ 19105269 (-) True G105890
TU132382 other downstream 2026056 18184484 ~ 18191195 (-) True AMCG00011316
TU133362 other upstream 2835840 23053316 ~ 23060966 (-) True AMCG00011409
TU133710 other upstream 4794729 25012205 ~ 25018332 (-) True AMCG00011445
TU134083 other upstream 6289467 26506943 ~ 26516507 (-) True AMCG00011485
TU134703 other upstream 9407608 29625084 ~ 29625387 (-) True G107713

Expression Profile