RNA id: TU132920



Basic Information


Item Value
RNA id TU132920
length 369
lncRNA type inter_gene
GC content 0.47
exon number 2
gene id G106224
representative True

Chromosome Information


Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 20272063 ~ 20276305 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CTCACCTCCACGGAAGACTCTGTGTTTTCTACCGGCATCTTGTCTTTCTCCACATGTCGCATCGTCTCTGAACCACTGGGGTCAACGTTCACAAGGTTTTGACTGACAGGTCTGATGTATCTGTATTCACTCTTCCCAGAATCTGTGGTCATGCACACCTCATAGTTATAGACGTGCTGTAGAGTTCCTGTAGCGCCAACGTCTGCGTAACGGGGCGGATAATACGCGCTGGGAATAACAGGGAGATTCCCATTGGATTTATAGAACAGACGAGACTGTCTCCATCTGCAGACCTTCACTGACACCAACACTATAACAGACACAATAAAGAGAAAGGACACCACAGCCAGAGACAAAACTAAATAGAAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU132906 lncRNA downstream 54587 20217251 ~ 20217476 (-) True G106212
TU132867 lncRNA downstream 156195 20071482 ~ 20115868 (-) True G106183
TU132870 lncRNA downstream 159853 20071482 ~ 20112210 (-) False G106183
TU132869 lncRNA downstream 176821 20071482 ~ 20095242 (-) False G106183
TU132868 lncRNA downstream 185299 20071482 ~ 20086764 (-) False G106183
TU132972 lncRNA upstream 209966 20486271 ~ 20488188 (-) True G106266
TU132985 lncRNA upstream 339133 20615438 ~ 20615642 (-) True G106278
TU133011 lncRNA upstream 635614 20911919 ~ 20912138 (-) True G106300
TU133063 lncRNA upstream 675455 20951760 ~ 20952855 (-) True G106340
TU133185 lncRNA upstream 1519320 21795625 ~ 21799926 (-) True G106448
AMCG00011362 mRNA downstream 359158 19909942 ~ 19912905 (-) True AMCG00011362
AMCG00011356 mRNA downstream 404250 19866119 ~ 19867813 (-) False AMCG00011356
AMCG00011354 mRNA downstream 447911 19817467 ~ 19824152 (-) True AMCG00011354
AMCG00011357 mRNA downstream 513020 19730492 ~ 19759043 (-) True AMCG00011357
AMCG00011355 mRNA downstream 545698 19721154 ~ 19726365 (-) True AMCG00011355
AMCG00011366 mRNA upstream 100637 20376942 ~ 20384649 (-) True AMCG00011366
AMCG00011367 mRNA upstream 109859 20386164 ~ 20390745 (-) True AMCG00011367
AMCG00011369 mRNA upstream 158153 20434458 ~ 20438919 (-) True AMCG00011369
AMCG00011368 mRNA upstream 164169 20440474 ~ 20477081 (-) True AMCG00011368
AMCG00011370 mRNA upstream 222817 20499122 ~ 20544751 (-) True AMCG00011370
TU132729 other downstream 404161 19865614 ~ 19867902 (-) True AMCG00011356
TU132572 other downstream 859048 19410368 ~ 19413015 (-) False G105970
TU132457 other downstream 1166794 19102293 ~ 19105269 (-) True G105890
TU132382 other downstream 2080868 18184484 ~ 18191195 (-) True AMCG00011316
TU133362 other upstream 2777011 23053316 ~ 23060966 (-) True AMCG00011409
TU133710 other upstream 4735900 25012205 ~ 25018332 (-) True AMCG00011445
TU134083 other upstream 6230638 26506943 ~ 26516507 (-) True AMCG00011485
TU134703 other upstream 9348779 29625084 ~ 29625387 (-) True G107713

Expression Profile