RNA id: TU132984



Basic Information


Item Value
RNA id TU132984
length 204
lncRNA type inter_gene
GC content 0.40
exon number 1
gene id G106277
representative True

Chromosome Information


Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 20615438 ~ 20615641 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


gcttctaactggagtgaggttgttagtggagttccacagggatcagtattagggcctttgctttttctaatctatattaatgatctggactctgggatagttagcaaacttgtcaaatttgcagatgatactaaaataggtggctcagcagatacaatcttggcagcacaggctattcaaagggacttagataatattcagttg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU132784 lncRNA upstream 452472 20115971 ~ 20162966 (+) False G106139
TU132783 lncRNA upstream 601090 19978247 ~ 20014348 (+) True G106138
TU132775 lncRNA upstream 619451 19957005 ~ 19995987 (+) True G106134
TU132777 lncRNA upstream 619451 19987204 ~ 19995987 (+) False G106134
TU132698 lncRNA upstream 811963 19803171 ~ 19803475 (+) True G106071
TU133009 lncRNA downstream 291809 20907450 ~ 20907653 (+) True G106298
TU133024 lncRNA downstream 336581 20952222 ~ 20952712 (+) True G106310
TU133048 lncRNA downstream 404569 21020210 ~ 21022119 (+) True G106327
TU133072 lncRNA downstream 413152 21028793 ~ 21033188 (+) True G106347
TU133087 lncRNA downstream 516057 21131698 ~ 21132430 (+) True G106361
AMCG00011365 mRNA upstream 276113 20323050 ~ 20339325 (+) True AMCG00011365
AMCG00011364 mRNA upstream 619468 19987249 ~ 19995970 (+) True AMCG00011364
AMCG00011363 mRNA upstream 657804 19956472 ~ 19957634 (+) True AMCG00011363
AMCG00011361 mRNA upstream 660351 19954620 ~ 19955087 (+) True AMCG00011361
AMCG00011359 mRNA upstream 696249 19914612 ~ 19919189 (+) True AMCG00011359
AMCG00011373 mRNA downstream 122741 20738382 ~ 20739024 (+) True AMCG00011373
AMCG00011374 mRNA downstream 339153 20954794 ~ 20958447 (+) True AMCG00011374
AMCG00011380 mRNA downstream 511469 21127110 ~ 21131535 (+) True AMCG00011380
AMCG00011381 mRNA downstream 611569 21227210 ~ 21236755 (+) True AMCG00011381
AMCG00011387 mRNA downstream 703783 21319424 ~ 21385863 (+) True AMCG00011387
TU132939 other upstream 248215 20361208 ~ 20367223 (+) True G106242
TU132823 other upstream 276351 20296011 ~ 20339087 (+) False AMCG00011365
TU132810 other upstream 452472 20095229 ~ 20162966 (+) False G106139
TU132789 other upstream 452472 20112080 ~ 20162966 (+) True G106139
TU132801 other upstream 452472 20118575 ~ 20162966 (+) False G106139
TU133378 other downstream 2725667 23341308 ~ 23341765 (+) True G106613
TU133383 other downstream 2740421 23356062 ~ 23356559 (+) True G106618
TU133489 other downstream 3133033 23748674 ~ 23753002 (+) True G106711
TU133992 other downstream 5740526 26356167 ~ 26360775 (+) True AMCG00011476
TU134100 other downstream 6154797 26770438 ~ 26771214 (+) True G107202

Expression Profile