RNA id: TU133011


Basic Information

Item Value
RNA id TU133011
length 220
lncRNA type inter_gene
GC content 0.27
exon number 1
gene id G106300
representative True

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 20911919 ~ 20912138 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GTAAAAACCCAaccttttaaattatgtatcttATGGATAAGATAGAAACATATATTTGTCTGTTCTTTTTCAGCTTTAGCCAGTTTCAAATTATTCTTGGGGATATTAACTTTAAAGAGATTAAGCACAAAAAACTGATTCTTGGGCCCATTTATttgatcacatttatttttttatttttctttatttttttgctaaTTTCCTTTGAGATGTCCAGCAa

Function

GO:

id name namespace
GO:0052547 regulation of peptidase activity biological_process
GO:0051336 regulation of hydrolase activity biological_process

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU132985 lncRNA downstream 296277 20615438 ~ 20615642 (-) True G106278
TU132972 lncRNA downstream 423731 20486271 ~ 20488188 (-) True G106266
TU132920 lncRNA downstream 635614 20272063 ~ 20276305 (-) True G106224
TU132906 lncRNA downstream 694443 20217251 ~ 20217476 (-) True G106212
TU132870 lncRNA downstream 799709 20071482 ~ 20112210 (-) False G106183
TU133063 lncRNA upstream 39622 20951760 ~ 20952855 (-) True G106340
TU133185 lncRNA upstream 883487 21795625 ~ 21799926 (-) True G106448
TU133190 lncRNA upstream 962674 21874812 ~ 21875126 (-) True G106453
TU133191 lncRNA upstream 1014715 21926853 ~ 21928367 (-) True G106454
TU133220 lncRNA upstream 1630511 22542649 ~ 22543019 (-) False AMCG00011391
AMCG00011375 mRNA downstream 4808 20892590 ~ 20907111 (-) True AMCG00011375
AMCG00011372 mRNA downstream 183778 20713938 ~ 20728141 (-) True AMCG00011372
AMCG00011371 mRNA downstream 251312 20645503 ~ 20660607 (-) True AMCG00011371
AMCG00011370 mRNA downstream 367168 20499122 ~ 20544751 (-) True AMCG00011370
AMCG00011368 mRNA downstream 434838 20440474 ~ 20477081 (-) True AMCG00011368
AMCG00011376 mRNA upstream 46726 20958864 ~ 20966129 (-) True AMCG00011376
AMCG00011379 mRNA upstream 64545 20976683 ~ 20977159 (-) True AMCG00011379
AMCG00011378 mRNA upstream 69271 20981409 ~ 20989043 (-) True AMCG00011378
AMCG00011377 mRNA upstream 82314 20994452 ~ 21007340 (-) True AMCG00011377
AMCG00011384 mRNA upstream 99733 21011871 ~ 21021937 (-) True AMCG00011384
TU132729 other downstream 1044017 19865614 ~ 19867902 (-) True AMCG00011356
TU132572 other downstream 1498904 19410368 ~ 19413015 (-) False G105970
TU132457 other downstream 1806650 19102293 ~ 19105269 (-) True G105890
TU132382 other downstream 2720724 18184484 ~ 18191195 (-) True AMCG00011316
TU133362 other upstream 2141178 23053316 ~ 23060966 (-) True AMCG00011409
TU133710 other upstream 4100067 25012205 ~ 25018332 (-) True AMCG00011445
TU134083 other upstream 5594805 26506943 ~ 26516507 (-) True AMCG00011485
TU134703 other upstream 8712946 29625084 ~ 29625387 (-) True G107713

Expression Profile