Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU133063 |
| length | 1064 |
| lncRNA type | inter_gene |
| GC content | 0.55 |
| exon number | 2 |
| gene id | G106340 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030133.1 |
| NCBI id | CM030133.1 |
| chromosome length | 32682731 |
| location | 20951760 ~ 20952855 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0072329 | monocarboxylic acid catabolic process | biological_process |
| GO:0017001 | antibiotic catabolic process | biological_process |
| GO:0019541 | propionate metabolic process | biological_process |
| GO:0019543 | propionate catabolic process | biological_process |
| GO:0009062 | fatty acid catabolic process | biological_process |
| GO:0019626 | short-chain fatty acid catabolic process | biological_process |
| GO:0046459 | short-chain fatty acid metabolic process | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU133011 | lncRNA | downstream | 39622 | 20911919 ~ 20912138 (-) | True | G106300 |
| TU132985 | lncRNA | downstream | 336118 | 20615438 ~ 20615642 (-) | True | G106278 |
| TU132972 | lncRNA | downstream | 463572 | 20486271 ~ 20488188 (-) | True | G106266 |
| TU132920 | lncRNA | downstream | 675455 | 20272063 ~ 20276305 (-) | True | G106224 |
| TU132906 | lncRNA | downstream | 734284 | 20217251 ~ 20217476 (-) | True | G106212 |
| TU133185 | lncRNA | upstream | 842770 | 21795625 ~ 21799926 (-) | True | G106448 |
| TU133190 | lncRNA | upstream | 921957 | 21874812 ~ 21875126 (-) | True | G106453 |
| TU133191 | lncRNA | upstream | 973998 | 21926853 ~ 21928367 (-) | True | G106454 |
| TU133220 | lncRNA | upstream | 1589794 | 22542649 ~ 22543019 (-) | False | AMCG00011391 |
| TU133248 | lncRNA | upstream | 1697645 | 22650500 ~ 22653658 (-) | True | G106509 |
| AMCG00011375 | mRNA | downstream | 44649 | 20892590 ~ 20907111 (-) | True | AMCG00011375 |
| AMCG00011372 | mRNA | downstream | 223619 | 20713938 ~ 20728141 (-) | True | AMCG00011372 |
| AMCG00011371 | mRNA | downstream | 291153 | 20645503 ~ 20660607 (-) | True | AMCG00011371 |
| AMCG00011370 | mRNA | downstream | 407009 | 20499122 ~ 20544751 (-) | True | AMCG00011370 |
| AMCG00011368 | mRNA | downstream | 474679 | 20440474 ~ 20477081 (-) | True | AMCG00011368 |
| AMCG00011376 | mRNA | upstream | 6009 | 20958864 ~ 20966129 (-) | True | AMCG00011376 |
| AMCG00011379 | mRNA | upstream | 23828 | 20976683 ~ 20977159 (-) | True | AMCG00011379 |
| AMCG00011378 | mRNA | upstream | 28554 | 20981409 ~ 20989043 (-) | True | AMCG00011378 |
| AMCG00011377 | mRNA | upstream | 41597 | 20994452 ~ 21007340 (-) | True | AMCG00011377 |
| AMCG00011384 | mRNA | upstream | 59016 | 21011871 ~ 21021937 (-) | True | AMCG00011384 |
| TU132729 | other | downstream | 1083858 | 19865614 ~ 19867902 (-) | True | AMCG00011356 |
| TU132572 | other | downstream | 1538745 | 19410368 ~ 19413015 (-) | False | G105970 |
| TU132457 | other | downstream | 1846491 | 19102293 ~ 19105269 (-) | True | G105890 |
| TU132382 | other | downstream | 2760565 | 18184484 ~ 18191195 (-) | True | AMCG00011316 |
| TU133362 | other | upstream | 2100461 | 23053316 ~ 23060966 (-) | True | AMCG00011409 |
| TU133710 | other | upstream | 4059350 | 25012205 ~ 25018332 (-) | True | AMCG00011445 |
| TU134083 | other | upstream | 5554088 | 26506943 ~ 26516507 (-) | True | AMCG00011485 |
| TU134703 | other | upstream | 8672229 | 29625084 ~ 29625387 (-) | True | G107713 |
