RNA id: TU133367


Basic Information

Item Value
RNA id TU133367
length 277
lncRNA type inter_gene
GC content 0.46
exon number 1
gene id G106603
representative True

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 23176480 ~ 23176756 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GGGATGTTTTGGAAATGCGTCTTTGCAAAACAGTCAGGGAGAAAGATTTGGGCACTGTAAAAATGGAGATACTCGAAGTCGAggtcatacatttaaaaagggacAGTGAAGAAATGAGGAGAGTTAATCAGATGCTTAGGGGAGAACTCAAATCAACTGAAGTTGAAAATGAGCATCTCAAGCAACAAATAGGGGCCCTGCAAGCTGCCTCTCGGTGGGCTGCAAAGCTGACACCTGACAGCAAAAAGGAACAGCTGGAACCGGCCAATGCACGGAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU133364 lncRNA downstream 79152 23094291 ~ 23097328 (-) True G106601
TU133348 lncRNA downstream 313528 22862608 ~ 22862952 (-) True G106587
TU133292 lncRNA downstream 415164 22759534 ~ 22761316 (-) True G106547
TU133286 lncRNA downstream 422864 22750482 ~ 22753616 (-) True AMCG00011399
TU133268 lncRNA downstream 479634 22696587 ~ 22696846 (-) True G106527
TU133368 lncRNA upstream 101 23176857 ~ 23177129 (-) True G106604
TU133370 lncRNA upstream 472 23177228 ~ 23177579 (-) True G106606
TU133416 lncRNA upstream 219757 23396513 ~ 23399092 (-) False AMCG00011414
TU133432 lncRNA upstream 340622 23517378 ~ 23517803 (-) True G106665
TU133456 lncRNA upstream 414345 23591101 ~ 23591309 (-) True G106682
AMCG00011409 mRNA downstream 117023 23053313 ~ 23059457 (-) False AMCG00011409
AMCG00011408 mRNA downstream 227470 22939740 ~ 22949010 (-) True AMCG00011408
AMCG00011401 mRNA downstream 386253 22780687 ~ 22790227 (-) True AMCG00011401
AMCG00011399 mRNA downstream 423388 22743430 ~ 22753092 (-) False AMCG00011399
AMCG00011398 mRNA downstream 433405 22738678 ~ 22743075 (-) True AMCG00011398
AMCG00011412 mRNA upstream 164244 23341000 ~ 23345841 (-) True AMCG00011412
AMCG00011413 mRNA upstream 174153 23350909 ~ 23361150 (-) True AMCG00011413
AMCG00011414 mRNA upstream 216348 23393104 ~ 23489642 (-) True AMCG00011414
AMCG00011415 mRNA upstream 322070 23498826 ~ 23508364 (-) True AMCG00011415
AMCG00011421 mRNA upstream 342045 23518801 ~ 23561929 (-) True AMCG00011421
TU133362 other downstream 115514 23053316 ~ 23060966 (-) True AMCG00011409
TU132729 other downstream 3308578 19865614 ~ 19867902 (-) True AMCG00011356
TU132572 other downstream 3763465 19410368 ~ 19413015 (-) False G105970
TU132457 other downstream 4071211 19102293 ~ 19105269 (-) True G105890
TU132383 other downstream 4985285 18184484 ~ 18191195 (-) False AMCG00011316
TU133710 other upstream 1835449 25012205 ~ 25018332 (-) True AMCG00011445
TU134083 other upstream 3330187 26506943 ~ 26516507 (-) True AMCG00011485
TU134703 other upstream 6448328 29625084 ~ 29625387 (-) True G107713

Expression Profile