RNA id: TU133368


Basic Information

Item Value
RNA id TU133368
length 273
lncRNA type inter_gene
GC content 0.38
exon number 1
gene id G106604
representative True

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 23176857 ~ 23177129 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ACTACGACGCAACTCGAAAAAGAGTCGATAGAGGTGGTGAAAGTTATGGCTAGCTTAGCACTTGCGAGCTCAAGGTTAGTGAACTGGAGCATAAGCAagtttgaaaaactgaaaaagctagGAGAAAAGTATGCAAAAGCGAAAGAAGAAAGAGACAAATACCATGGAATGGTTTTAGAATTTGAAGGAAAGCTAGATACTTGTGGAAAACAAGTCATTGTGTTGAATGCTGAAAAAGAGGACTTAATTGAACAGAGAGAGCAATTAGGAAAT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU133367 lncRNA downstream 101 23176480 ~ 23176756 (-) True G106603
TU133364 lncRNA downstream 79529 23094291 ~ 23097328 (-) True G106601
TU133348 lncRNA downstream 313905 22862608 ~ 22862952 (-) True G106587
TU133292 lncRNA downstream 415541 22759534 ~ 22761316 (-) True G106547
TU133286 lncRNA downstream 423241 22750482 ~ 22753616 (-) True AMCG00011399
TU133370 lncRNA upstream 99 23177228 ~ 23177579 (-) True G106606
TU133416 lncRNA upstream 219384 23396513 ~ 23399092 (-) False AMCG00011414
TU133432 lncRNA upstream 340249 23517378 ~ 23517803 (-) True G106665
TU133456 lncRNA upstream 413972 23591101 ~ 23591309 (-) True G106682
TU133511 lncRNA upstream 618551 23795680 ~ 23797219 (-) True G106723
AMCG00011409 mRNA downstream 117400 23053313 ~ 23059457 (-) False AMCG00011409
AMCG00011408 mRNA downstream 227847 22939740 ~ 22949010 (-) True AMCG00011408
AMCG00011401 mRNA downstream 386630 22780687 ~ 22790227 (-) True AMCG00011401
AMCG00011399 mRNA downstream 423765 22743430 ~ 22753092 (-) False AMCG00011399
AMCG00011398 mRNA downstream 433782 22738678 ~ 22743075 (-) True AMCG00011398
AMCG00011412 mRNA upstream 163871 23341000 ~ 23345841 (-) True AMCG00011412
AMCG00011413 mRNA upstream 173780 23350909 ~ 23361150 (-) True AMCG00011413
AMCG00011414 mRNA upstream 215975 23393104 ~ 23489642 (-) True AMCG00011414
AMCG00011415 mRNA upstream 321697 23498826 ~ 23508364 (-) True AMCG00011415
AMCG00011421 mRNA upstream 341672 23518801 ~ 23561929 (-) True AMCG00011421
TU133362 other downstream 115891 23053316 ~ 23060966 (-) True AMCG00011409
TU132729 other downstream 3308955 19865614 ~ 19867902 (-) True AMCG00011356
TU132572 other downstream 3763842 19410368 ~ 19413015 (-) False G105970
TU132457 other downstream 4071588 19102293 ~ 19105269 (-) True G105890
TU132383 other downstream 4985662 18184484 ~ 18191195 (-) False AMCG00011316
TU133710 other upstream 1835076 25012205 ~ 25018332 (-) True AMCG00011445
TU134083 other upstream 3329814 26506943 ~ 26516507 (-) True AMCG00011485
TU134703 other upstream 6447955 29625084 ~ 29625387 (-) True G107713

Expression Profile