RNA id: TU133456


Basic Information

Item Value
RNA id TU133456
length 209
lncRNA type inter_gene
GC content 0.39
exon number 1
gene id G106682
representative True

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 23591101 ~ 23591309 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

AGTAATTCAGAATCTGTTTATGCTGTTTCGCTTACTGTTGATAGAAATGTGTAAACTGGTTCATTTTCTCCTGTCTGTCTCTTCCCTGGTGTTTATCTGTTCCTCTTTAGAGAAATGTCAAAAACGTACATCATGAGTACTAATTACCAGAGAACAGTTTGAACACAgtgttttgttccaaccaagcctCCTATGTGTTGTCGGCAGTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU133432 lncRNA downstream 73298 23517378 ~ 23517803 (-) True G106665
TU133416 lncRNA downstream 192009 23396513 ~ 23399092 (-) False AMCG00011414
TU133370 lncRNA downstream 413522 23177228 ~ 23177579 (-) True G106606
TU133368 lncRNA downstream 413972 23176857 ~ 23177129 (-) True G106604
TU133367 lncRNA downstream 414345 23176480 ~ 23176756 (-) True G106603
TU133511 lncRNA upstream 204371 23795680 ~ 23797219 (-) True G106723
TU133519 lncRNA upstream 222548 23813857 ~ 23817543 (-) True AMCG00011428
TU133521 lncRNA upstream 237989 23829298 ~ 23834974 (-) True AMCG00011427
TU133612 lncRNA upstream 990647 24581956 ~ 24582174 (-) True G106817
TU133665 lncRNA upstream 1324855 24916164 ~ 24919197 (-) True G106862
AMCG00011421 mRNA downstream 29172 23518801 ~ 23561929 (-) True AMCG00011421
AMCG00011415 mRNA downstream 82737 23498826 ~ 23508364 (-) True AMCG00011415
AMCG00011414 mRNA downstream 101459 23393104 ~ 23489642 (-) True AMCG00011414
AMCG00011413 mRNA downstream 229951 23350909 ~ 23361150 (-) True AMCG00011413
AMCG00011412 mRNA downstream 245260 23341000 ~ 23345841 (-) True AMCG00011412
AMCG00011424 mRNA upstream 19420 23610729 ~ 23611511 (-) True AMCG00011424
AMCG00011423 mRNA upstream 147467 23738776 ~ 23741793 (-) True AMCG00011423
AMCG00011422 mRNA upstream 151769 23743078 ~ 23749052 (-) True AMCG00011422
AMCG00011428 mRNA upstream 223204 23814513 ~ 23815783 (-) False AMCG00011428
AMCG00011427 mRNA upstream 237988 23829297 ~ 23835074 (-) False AMCG00011427
TU133362 other downstream 530135 23053316 ~ 23060966 (-) True AMCG00011409
TU132729 other downstream 3723199 19865614 ~ 19867902 (-) True AMCG00011356
TU132572 other downstream 4178086 19410368 ~ 19413015 (-) False G105970
TU132457 other downstream 4485832 19102293 ~ 19105269 (-) True G105890
TU132383 other downstream 5399906 18184484 ~ 18191195 (-) False AMCG00011316
TU133710 other upstream 1420896 25012205 ~ 25018332 (-) True AMCG00011445
TU134083 other upstream 2915634 26506943 ~ 26516507 (-) True AMCG00011485
TU134703 other upstream 6033775 29625084 ~ 29625387 (-) True G107713

Expression Profile