RNA id: TU133612


Basic Information

Item Value
RNA id TU133612
length 219
lncRNA type inter_gene
GC content 0.36
exon number 1
gene id G106817
representative True

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 24581956 ~ 24582174 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

atttgatcccctgctgattttgtacgtttgcccactgacaaagaaatgatcagtctataattttaatggtaggtgtattttaacagtgagagacagaacaacagcaaaaaaatccagaaaaacgcatttcaaaaaagttacaaatttatttgcatgttaatgagggaaataagtactTGATCCCCTATCattcagcaagatttctggctcccaggtgtc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU133521 lncRNA downstream 746982 23829298 ~ 23834974 (-) True AMCG00011427
TU133519 lncRNA downstream 764413 23813857 ~ 23817543 (-) True AMCG00011428
TU133511 lncRNA downstream 784737 23795680 ~ 23797219 (-) True G106723
TU133456 lncRNA downstream 990647 23591101 ~ 23591309 (-) True G106682
TU133432 lncRNA downstream 1064153 23517378 ~ 23517803 (-) True G106665
TU133665 lncRNA upstream 333990 24916164 ~ 24919197 (-) True G106862
TU133694 lncRNA upstream 404631 24986805 ~ 24991176 (-) True G106885
TU133876 lncRNA upstream 1423805 26005979 ~ 26006456 (-) True G107035
TU133878 lncRNA upstream 1427346 26009520 ~ 26012447 (-) True G107037
TU133879 lncRNA upstream 1433810 26015984 ~ 26016680 (-) True G107038
AMCG00011436 mRNA downstream 377633 24202755 ~ 24204323 (-) True AMCG00011436
AMCG00011433 mRNA downstream 479031 24089272 ~ 24102925 (-) True AMCG00011433
AMCG00011432 mRNA downstream 581498 23994138 ~ 24000458 (-) True AMCG00011432
AMCG00011431 mRNA downstream 602193 23966119 ~ 23979763 (-) True AMCG00011431
AMCG00011427 mRNA downstream 746882 23829297 ~ 23835074 (-) False AMCG00011427
AMCG00011442 mRNA upstream 333042 24915216 ~ 24957646 (-) True AMCG00011442
AMCG00011446 mRNA upstream 410174 24992348 ~ 25003276 (-) True AMCG00011446
AMCG00011445 mRNA upstream 432645 25014819 ~ 25018314 (-) False AMCG00011445
AMCG00011448 mRNA upstream 467001 25049175 ~ 25054840 (-) True AMCG00011448
AMCG00011447 mRNA upstream 473221 25055395 ~ 25071697 (-) True AMCG00011447
TU133362 other downstream 1520990 23053316 ~ 23060966 (-) True AMCG00011409
TU132729 other downstream 4714054 19865614 ~ 19867902 (-) True AMCG00011356
TU132572 other downstream 5168941 19410368 ~ 19413015 (-) False G105970
TU132457 other downstream 5476687 19102293 ~ 19105269 (-) True G105890
TU132383 other downstream 6390761 18184484 ~ 18191195 (-) False AMCG00011316
TU133710 other upstream 430031 25012205 ~ 25018332 (-) True AMCG00011445
TU134083 other upstream 1924769 26506943 ~ 26516507 (-) True AMCG00011485
TU134703 other upstream 5042910 29625084 ~ 29625387 (-) True G107713

Expression Profile