RNA id: TU133766



Basic Information


Item Value
RNA id TU133766
length 267
lncRNA type inter_gene
GC content 0.49
exon number 1
gene id G106947
representative True

Chromosome Information


Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 25371479 ~ 25371745 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


tccatttgtgtccccgggtgcatgtgtccctgctgatctggaaaagctcctctggtttgatgtggtcgatgcctttcatgattttgaagacttggatcaagtccccacgtagtctcctctgttccagggtgaaaaggttcagttcctcagtctctcagtaggactttcccttcagacctggaataagtctggttgctctcctctgaactgcctctagagcagcgatatctttcttgaagtgtggagcccagaactgtacacagtatc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU133765 lncRNA upstream 33712 25337552 ~ 25337767 (+) True G106946
TU133720 lncRNA upstream 322332 25047524 ~ 25049147 (+) True G106906
TU133680 lncRNA upstream 380242 24986838 ~ 24991237 (+) True G106874
TU133681 lncRNA upstream 380305 24986838 ~ 24991174 (+) False G106874
TU133666 lncRNA upstream 427801 24919851 ~ 24943678 (+) True G106863
TU133779 lncRNA downstream 239874 25611619 ~ 25611879 (+) False AMCG00011455
TU133783 lncRNA downstream 294379 25666124 ~ 25667782 (+) True G106961
TU133788 lncRNA downstream 302671 25674416 ~ 25677419 (+) True G106966
TU133796 lncRNA downstream 326507 25698252 ~ 25720586 (+) True G106973
TU133824 lncRNA downstream 423668 25795413 ~ 25795612 (+) True G106994
AMCG00011452 mRNA upstream 200283 25170708 ~ 25171196 (+) True AMCG00011452
AMCG00011453 mRNA upstream 200809 25169500 ~ 25170670 (+) True AMCG00011453
AMCG00011449 mRNA upstream 256986 25106328 ~ 25114493 (+) True AMCG00011449
AMCG00011451 mRNA upstream 266374 25094529 ~ 25105105 (+) True AMCG00011451
AMCG00011450 mRNA upstream 277991 25071737 ~ 25093488 (+) True AMCG00011450
AMCG00011455 mRNA downstream 236241 25607986 ~ 25662179 (+) True AMCG00011455
AMCG00011458 mRNA downstream 390091 25761836 ~ 25766078 (+) True AMCG00011458
AMCG00011461 mRNA downstream 431167 25802912 ~ 25811978 (+) True AMCG00011461
AMCG00011460 mRNA downstream 477828 25849573 ~ 25877546 (+) True AMCG00011460
AMCG00011462 mRNA downstream 541779 25913524 ~ 25916673 (+) True AMCG00011462
TU133489 other upstream 1618477 23748674 ~ 23753002 (+) True G106711
TU133383 other upstream 2014920 23356062 ~ 23356559 (+) True G106618
TU133378 other upstream 2029714 23341308 ~ 23341765 (+) True G106613
TU132939 other upstream 5004256 20361208 ~ 20367223 (+) True G106242
TU132823 other upstream 5032392 20296011 ~ 20339087 (+) False AMCG00011365
TU133992 other downstream 984422 26356167 ~ 26360775 (+) True AMCG00011476
TU134100 other downstream 1398693 26770438 ~ 26771214 (+) True G107202
TU134126 other downstream 1446307 26818052 ~ 26830055 (+) False AMCG00011488
TU134311 other downstream 2340461 27712206 ~ 27727867 (+) True G107394
TU134734 other downstream 4325856 29697601 ~ 29699419 (+) True G107741

Expression Profile