Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU134100 |
| length | 352 |
| RNA type | TUCP |
| GC content | 0.53 |
| exon number | 2 |
| gene id | G107202 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030133.1 |
| NCBI id | CM030133.1 |
| chromosome length | 32682731 |
| location | 26770438 ~ 26771214 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0072329 | monocarboxylic acid catabolic process | biological_process |
| GO:0017001 | antibiotic catabolic process | biological_process |
| GO:0019541 | propionate metabolic process | biological_process |
| GO:0019543 | propionate catabolic process | biological_process |
| GO:0009062 | fatty acid catabolic process | biological_process |
| GO:0019626 | short-chain fatty acid catabolic process | biological_process |
| GO:0046459 | short-chain fatty acid metabolic process | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU134004 | lncRNA | upstream | 318863 | 26447202 ~ 26451575 (+) | True | G107128 |
| TU134002 | lncRNA | upstream | 382454 | 26387748 ~ 26387984 (+) | True | G107126 |
| TU133952 | lncRNA | upstream | 477991 | 26277374 ~ 26292447 (+) | True | G107098 |
| TU133936 | lncRNA | upstream | 567819 | 26199950 ~ 26202619 (+) | True | G107084 |
| TU133839 | lncRNA | upstream | 881600 | 25882692 ~ 25888838 (+) | True | G107004 |
| TU134125 | lncRNA | downstream | 68227 | 26839441 ~ 26842778 (+) | False | AMCG00011488 |
| TU134230 | lncRNA | downstream | 696190 | 27467404 ~ 27468567 (+) | True | G107321 |
| TU134242 | lncRNA | downstream | 726113 | 27497327 ~ 27501442 (+) | True | G107331 |
| TU134298 | lncRNA | downstream | 842747 | 27613961 ~ 27615738 (+) | True | G107382 |
| TU134320 | lncRNA | downstream | 1019652 | 27790866 ~ 27830847 (+) | False | G107402 |
| AMCG00011477 | mRNA | upstream | 334980 | 26413301 ~ 26435458 (+) | True | AMCG00011477 |
| AMCG00011478 | mRNA | upstream | 361065 | 26401965 ~ 26409373 (+) | True | AMCG00011478 |
| AMCG00011483 | mRNA | upstream | 372456 | 26388294 ~ 26397982 (+) | True | AMCG00011483 |
| AMCG00011476 | mRNA | upstream | 409798 | 26358865 ~ 26360640 (+) | False | AMCG00011476 |
| AMCG00011472 | mRNA | upstream | 505911 | 26245927 ~ 26264527 (+) | True | AMCG00011472 |
| AMCG00011488 | mRNA | downstream | 56107 | 26827321 ~ 26842792 (+) | True | AMCG00011488 |
| AMCG00011491 | mRNA | downstream | 139137 | 26910351 ~ 26923941 (+) | True | AMCG00011491 |
| AMCG00011490 | mRNA | downstream | 186928 | 26958142 ~ 26969283 (+) | True | AMCG00011490 |
| AMCG00011493 | mRNA | downstream | 287778 | 27058992 ~ 27067377 (+) | True | AMCG00011493 |
| AMCG00011494 | mRNA | downstream | 417337 | 27188551 ~ 27195648 (+) | True | AMCG00011494 |
| TU133992 | other | upstream | 409663 | 26356167 ~ 26360775 (+) | True | AMCG00011476 |
| TU133489 | other | upstream | 3017436 | 23748674 ~ 23753002 (+) | True | G106711 |
| TU133383 | other | upstream | 3413879 | 23356062 ~ 23356559 (+) | True | G106618 |
| TU133378 | other | upstream | 3428673 | 23341308 ~ 23341765 (+) | True | G106613 |
| TU132939 | other | upstream | 6403215 | 20361208 ~ 20367223 (+) | True | G106242 |
| TU134126 | other | downstream | 46838 | 26818052 ~ 26830055 (+) | False | AMCG00011488 |
| TU134311 | other | downstream | 940992 | 27712206 ~ 27727867 (+) | True | G107394 |
| TU134734 | other | downstream | 2926387 | 29697601 ~ 29699419 (+) | True | G107741 |
| TU134787 | other | downstream | 3086756 | 29857970 ~ 29875476 (+) | True | G107784 |
| TU134867 | other | downstream | 3400574 | 30171788 ~ 30212090 (+) | True | G107858 |
