RNA id: TU134137


Basic Information

Item Value
RNA id TU134137
length 244
lncRNA type inter_gene
GC content 0.55
exon number 1
gene id G107237
representative True

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 26910515 ~ 26910758 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CCCGAAAAGCTCGGGGTCTCCTGTGCTGTACTGGTTGGAGGCAGGGGAGGTGTCTGAGTGGTCGTTGCACCATTGCAGCTCGCTGAGGCAGTTGACAGAATCGAAATCGCTGGCGTCCAGCTGAGACAAGTCGATGTCTGGAAAGTCAGTGTCCAGCCGGTCAGAGCAGACTTCCTCCTCCTCGTACTGTAATACAcatgggaagagagagagagagagagagagagagagagagagagagaga

Function

GO: NA

KEGG:

id description
ko04972 Pancreatic secretion
ko04974 Protein digestion and absorption
ko04975 Fat digestion and absorption

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU134131 lncRNA downstream 67729 26838167 ~ 26842786 (-) True G107233
TU134130 lncRNA downstream 76665 26833565 ~ 26833850 (-) True G107232
TU134043 lncRNA downstream 501140 26388212 ~ 26409375 (-) True G107167
TU134049 lncRNA downstream 501140 26388212 ~ 26409375 (-) False G107167
TU134045 lncRNA downstream 511664 26388212 ~ 26398851 (-) False G107167
TU134138 lncRNA upstream 1250 26912008 ~ 26912220 (-) True G107238
TU134141 lncRNA upstream 4754 26915512 ~ 26915968 (-) True G107241
TU134175 lncRNA upstream 161729 27072487 ~ 27072708 (-) True G107275
TU134190 lncRNA upstream 336206 27246964 ~ 27247180 (-) True G107289
TU134192 lncRNA upstream 336981 27247739 ~ 27286457 (-) True G107290
AMCG00011489 mRNA downstream 92157 26804882 ~ 26818358 (-) True AMCG00011489
AMCG00011487 mRNA downstream 178835 26688414 ~ 26731680 (-) True AMCG00011487
AMCG00011486 mRNA downstream 268549 26571172 ~ 26641966 (-) True AMCG00011486
AMCG00011485 mRNA downstream 394179 26509714 ~ 26516336 (-) False AMCG00011485
AMCG00011484 mRNA downstream 420042 26446580 ~ 26490473 (-) True AMCG00011484
AMCG00011492 mRNA upstream 20628 26931386 ~ 26943383 (-) True AMCG00011492
AMCG00011501 mRNA upstream 504430 27415188 ~ 27423491 (-) True AMCG00011501
AMCG00011503 mRNA upstream 586551 27497309 ~ 27529953 (-) True AMCG00011503
AMCG00011506 mRNA upstream 687356 27598114 ~ 27606988 (-) True AMCG00011506
AMCG00011507 mRNA upstream 709751 27620509 ~ 27639480 (-) True AMCG00011507
TU134083 other downstream 394008 26506943 ~ 26516507 (-) True AMCG00011485
TU133710 other downstream 1892183 25012205 ~ 25018332 (-) True AMCG00011445
TU133362 other downstream 3849549 23053316 ~ 23060966 (-) True AMCG00011409
TU132729 other downstream 7042613 19865614 ~ 19867902 (-) True AMCG00011356
TU132572 other downstream 7497500 19410368 ~ 19413015 (-) False G105970
TU134703 other upstream 2714326 29625084 ~ 29625387 (-) True G107713

Expression Profile