RNA id: TU134190


Basic Information

Item Value
RNA id TU134190
length 217
lncRNA type inter_gene
GC content 0.43
exon number 1
gene id G107289
representative True

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 27246964 ~ 27247180 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

cctttcctttgtccagtcaaaccagtctttccacattctttcctaccaggtgcacctgttctgtcctcctctcctatcattggtcaatctttcattcacctcattcaaaccctctctccttcacagtacttaaacccctctgtttcatagattcattgtgaagtcttgctttctttctagaatcaattctgagccttgtttcGTGTTTGCTTCTccg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU134175 lncRNA downstream 174256 27072487 ~ 27072708 (-) True G107275
TU134141 lncRNA downstream 330996 26915512 ~ 26915968 (-) True G107241
TU134138 lncRNA downstream 334744 26912008 ~ 26912220 (-) True G107238
TU134137 lncRNA downstream 336206 26910515 ~ 26910758 (-) True G107237
TU134131 lncRNA downstream 404178 26838167 ~ 26842786 (-) True G107233
TU134192 lncRNA upstream 559 27247739 ~ 27286457 (-) True G107290
TU134199 lncRNA upstream 29803 27276983 ~ 27279308 (-) True G107296
TU134193 lncRNA upstream 34774 27281954 ~ 27292313 (-) False G107290
TU134213 lncRNA upstream 161338 27408518 ~ 27408737 (-) True G107308
TU134260 lncRNA upstream 300027 27547207 ~ 27549867 (-) True G107348
AMCG00011492 mRNA downstream 303581 26931386 ~ 26943383 (-) True AMCG00011492
AMCG00011489 mRNA downstream 428606 26804882 ~ 26818358 (-) True AMCG00011489
AMCG00011487 mRNA downstream 515284 26688414 ~ 26731680 (-) True AMCG00011487
AMCG00011486 mRNA downstream 604998 26571172 ~ 26641966 (-) True AMCG00011486
AMCG00011485 mRNA downstream 730628 26509714 ~ 26516336 (-) False AMCG00011485
AMCG00011501 mRNA upstream 168008 27415188 ~ 27423491 (-) True AMCG00011501
AMCG00011503 mRNA upstream 250129 27497309 ~ 27529953 (-) True AMCG00011503
AMCG00011506 mRNA upstream 350934 27598114 ~ 27606988 (-) True AMCG00011506
AMCG00011507 mRNA upstream 373329 27620509 ~ 27639480 (-) True AMCG00011507
AMCG00011508 mRNA upstream 422615 27669795 ~ 27679146 (-) True AMCG00011508
TU134083 other downstream 730457 26506943 ~ 26516507 (-) True AMCG00011485
TU133710 other downstream 2228632 25012205 ~ 25018332 (-) True AMCG00011445
TU133362 other downstream 4185998 23053316 ~ 23060966 (-) True AMCG00011409
TU132729 other downstream 7379062 19865614 ~ 19867902 (-) True AMCG00011356
TU132572 other downstream 7833949 19410368 ~ 19413015 (-) False G105970
TU134703 other upstream 2377904 29625084 ~ 29625387 (-) True G107713

Expression Profile