RNA id: TU134213


Basic Information

Item Value
RNA id TU134213
length 220
lncRNA type inter_gene
GC content 0.34
exon number 1
gene id G107308
representative True

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 27408518 ~ 27408737 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

acatcaatgtgaaagactggcagagagcatgccaagacacatAAAAGcggtgattgaaaatcagggttattccaccaaatattgatttctgaactcttcctaagttaaaacattagtattgtgttgtttaaaaatgaatatgaacttattttctttgcattattcgaggtctgacaacactgcatcttttttgtaattttgaccagttgtcattttctgc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU134193 lncRNA downstream 116205 27281954 ~ 27292313 (-) False G107290
TU134192 lncRNA downstream 122061 27247739 ~ 27286457 (-) True G107290
TU134199 lncRNA downstream 129210 27276983 ~ 27279308 (-) True G107296
TU134190 lncRNA downstream 161338 27246964 ~ 27247180 (-) True G107289
TU134175 lncRNA downstream 335810 27072487 ~ 27072708 (-) True G107275
TU134260 lncRNA upstream 138470 27547207 ~ 27549867 (-) True G107348
TU134299 lncRNA upstream 205198 27613935 ~ 27615738 (-) True G107383
TU134325 lncRNA upstream 382158 27790895 ~ 27845007 (-) False G107406
TU134327 lncRNA upstream 382158 27790895 ~ 27839465 (-) True G107406
TU134330 lncRNA upstream 474311 27883048 ~ 27883580 (-) True G107409
AMCG00011492 mRNA downstream 465135 26931386 ~ 26943383 (-) True AMCG00011492
AMCG00011489 mRNA downstream 590160 26804882 ~ 26818358 (-) True AMCG00011489
AMCG00011487 mRNA downstream 676838 26688414 ~ 26731680 (-) True AMCG00011487
AMCG00011486 mRNA downstream 766552 26571172 ~ 26641966 (-) True AMCG00011486
AMCG00011485 mRNA downstream 892182 26509714 ~ 26516336 (-) False AMCG00011485
AMCG00011501 mRNA upstream 6451 27415188 ~ 27423491 (-) True AMCG00011501
AMCG00011503 mRNA upstream 88572 27497309 ~ 27529953 (-) True AMCG00011503
AMCG00011506 mRNA upstream 189377 27598114 ~ 27606988 (-) True AMCG00011506
AMCG00011507 mRNA upstream 211772 27620509 ~ 27639480 (-) True AMCG00011507
AMCG00011508 mRNA upstream 261058 27669795 ~ 27679146 (-) True AMCG00011508
TU134083 other downstream 892011 26506943 ~ 26516507 (-) True AMCG00011485
TU133710 other downstream 2390186 25012205 ~ 25018332 (-) True AMCG00011445
TU133362 other downstream 4347552 23053316 ~ 23060966 (-) True AMCG00011409
TU132729 other downstream 7540616 19865614 ~ 19867902 (-) True AMCG00011356
TU132572 other downstream 7995503 19410368 ~ 19413015 (-) False G105970
TU134703 other upstream 2216347 29625084 ~ 29625387 (-) True G107713

Expression Profile