RNA id: TU134447


Basic Information

Item Value
RNA id TU134447
length 225
lncRNA type inter_gene
GC content 0.35
exon number 1
gene id G107503
representative True

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 28666162 ~ 28666386 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

tctgacctctgtgattgccaacaagggttttgccaccaagtactaagtcgaatacatatttccctcattaacatgcaaatcaatttataacttttttggaatgcgtttttctggatttttttgttgttattctgtctctcactgttaaaatacacctatcattaaaattatagactgatcatttctttgtcagtgggcaaatgtacagaatcagcaggggatcaa

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU134413 lncRNA downstream 102585 28563067 ~ 28563577 (-) True G107471
TU134332 lncRNA downstream 778393 27887467 ~ 27887769 (-) True G107411
TU134330 lncRNA downstream 782582 27883048 ~ 27883580 (-) True G107409
TU134325 lncRNA downstream 821155 27790895 ~ 27845007 (-) False G107406
TU134327 lncRNA downstream 826697 27790895 ~ 27839465 (-) True G107406
TU134553 lncRNA upstream 266451 28932837 ~ 28933182 (-) True G107597
TU134561 lncRNA upstream 267911 28934297 ~ 28967451 (-) True G107602
TU134600 lncRNA upstream 536179 29202565 ~ 29203192 (-) True G107638
TU134636 lncRNA upstream 637155 29303541 ~ 29303835 (-) True G107665
TU134637 lncRNA upstream 638545 29304931 ~ 29305160 (-) True G107666
AMCG00011517 mRNA downstream 640261 28024230 ~ 28025901 (-) True AMCG00011517
AMCG00011515 mRNA downstream 713019 27916933 ~ 27953143 (-) True AMCG00011515
AMCG00011514 mRNA downstream 770851 27891757 ~ 27895311 (-) True AMCG00011514
AMCG00011509 mRNA downstream 953205 27712140 ~ 27712957 (-) True AMCG00011509
AMCG00011508 mRNA downstream 987016 27669795 ~ 27679146 (-) True AMCG00011508
AMCG00011520 mRNA upstream 131844 28798230 ~ 28816286 (-) True AMCG00011520
AMCG00011521 mRNA upstream 157272 28823658 ~ 28851487 (-) True AMCG00011521
AMCG00011522 mRNA upstream 207747 28874133 ~ 28880153 (-) True AMCG00011522
AMCG00011524 mRNA upstream 305839 28972225 ~ 29043557 (-) True AMCG00011524
AMCG00011528 mRNA upstream 542954 29209340 ~ 29222205 (-) True AMCG00011528
TU134083 other downstream 2149655 26506943 ~ 26516507 (-) True AMCG00011485
TU133710 other downstream 3647830 25012205 ~ 25018332 (-) True AMCG00011445
TU133362 other downstream 5605196 23053316 ~ 23060966 (-) True AMCG00011409
TU132729 other downstream 8798260 19865614 ~ 19867902 (-) True AMCG00011356
TU132572 other downstream 9253147 19410368 ~ 19413015 (-) False G105970
TU134703 other upstream 958698 29625084 ~ 29625387 (-) True G107713

Expression Profile