RNA id: TU134638


Basic Information

Item Value
RNA id TU134638
length 304
lncRNA type inter_gene
GC content 0.50
exon number 1
gene id G107667
representative True

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 29309873 ~ 29310176 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

TTTCTTAAAACCCAGGTTGGGCACCTTGCAGATGGGGGAGCCCCTGCGCTCCATGAAGGGATAGAGCTGATCCAGGAAGTGTTGTTCCTCAGGCTGGGGGAGCCAGCCCCCCTCACACTGTGCCTCCACACTGCCCATCACATTCTCCTGCACACACAGCCAGAGAGCaatgctcacacacaaacattttgcaATGTTACTGCCCTGTCCCAGCACAAAGAAACCTCACTTTCAGTAGTCAGAAGCAGACAAATTAACTGCAGtgcaaaaaacatttcatattgtGGAATAAAAGAAGCTACCC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU134637 lncRNA downstream 4713 29304931 ~ 29305160 (-) True G107666
TU134636 lncRNA downstream 6038 29303541 ~ 29303835 (-) True G107665
TU134600 lncRNA downstream 106681 29202565 ~ 29203192 (-) True G107638
TU134561 lncRNA downstream 342422 28934297 ~ 28967451 (-) True G107602
TU134553 lncRNA downstream 376691 28932837 ~ 28933182 (-) True G107597
TU134639 lncRNA upstream 6226 29316402 ~ 29316892 (-) True G107668
TU134640 lncRNA upstream 12709 29322885 ~ 29323653 (-) True G107669
TU134670 lncRNA upstream 44239 29354415 ~ 29438661 (-) True G107691
TU134675 lncRNA upstream 91859 29402035 ~ 29488480 (-) True G107695
TU134682 lncRNA upstream 91859 29402035 ~ 29488480 (-) False G107695
AMCG00011528 mRNA downstream 87668 29209340 ~ 29222205 (-) True AMCG00011528
AMCG00011524 mRNA downstream 266316 28972225 ~ 29043557 (-) True AMCG00011524
AMCG00011522 mRNA downstream 429720 28874133 ~ 28880153 (-) True AMCG00011522
AMCG00011521 mRNA downstream 458386 28823658 ~ 28851487 (-) True AMCG00011521
AMCG00011520 mRNA downstream 493587 28798230 ~ 28816286 (-) True AMCG00011520
AMCG00011531 mRNA upstream 134427 29444603 ~ 29461210 (-) True AMCG00011531
AMCG00011532 mRNA upstream 181732 29491908 ~ 29514008 (-) True AMCG00011532
AMCG00011534 mRNA upstream 376009 29686185 ~ 29739369 (-) True AMCG00011534
AMCG00011536 mRNA upstream 577237 29887413 ~ 29920020 (-) False AMCG00011536
AMCG00011535 mRNA upstream 657299 29967475 ~ 29982671 (-) True AMCG00011535
TU134083 other downstream 2793366 26506943 ~ 26516507 (-) True AMCG00011485
TU133710 other downstream 4291541 25012205 ~ 25018332 (-) True AMCG00011445
TU133362 other downstream 6248907 23053316 ~ 23060966 (-) True AMCG00011409
TU132729 other downstream 9441971 19865614 ~ 19867902 (-) True AMCG00011356
TU132572 other downstream 9896858 19410368 ~ 19413015 (-) False G105970
TU134703 other upstream 314908 29625084 ~ 29625387 (-) True G107713

Expression Profile