RNA id: TU134703


Basic Information

Item Value
RNA id TU134703
length 304
RNA type TUCP
GC content 0.62
exon number 1
gene id G107713
representative True

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 29625084 ~ 29625387 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

AAGCACTGACGCTCCAGCtgcagcggccactccctcaagtcgtgggtcccgaccaggtctgcGGTGCCCAGGGGAGATCGGCGGCcgacaacgccatgctgctcagggatgtcgtggcctactcgaacgagagagggcttcccctggtcctaatcagcctggaccaggagaaagccttcgacagagtgggccacgaatacctgcagcacgtcatggagaggatgggtctcgctcttggcctgaggaaGTGGGTGAAGATCATCTACAgcggcctaagcagcagggtccttgtgaaccgccacct

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU134701 lncRNA downstream 7346 29617521 ~ 29617738 (-) True G107711
TU134695 lncRNA downstream 67772 29556808 ~ 29557312 (-) True G107705
TU134675 lncRNA downstream 136604 29402035 ~ 29488480 (-) True G107695
TU134682 lncRNA downstream 136604 29402035 ~ 29488480 (-) False G107695
TU134670 lncRNA downstream 186423 29354415 ~ 29438661 (-) True G107691
TU134718 lncRNA upstream 46184 29671571 ~ 29673113 (-) True G107728
TU134722 lncRNA upstream 55423 29680810 ~ 29681026 (-) True G107732
TU134766 lncRNA upstream 161647 29787034 ~ 29787355 (-) True G107765
TU134771 lncRNA upstream 171268 29796655 ~ 29800616 (-) True G107770
TU134772 lncRNA upstream 171268 29796655 ~ 29800616 (-) False G107770
AMCG00011532 mRNA downstream 111076 29491908 ~ 29514008 (-) True AMCG00011532
AMCG00011531 mRNA downstream 163874 29444603 ~ 29461210 (-) True AMCG00011531
AMCG00011528 mRNA downstream 402879 29209340 ~ 29222205 (-) True AMCG00011528
AMCG00011524 mRNA downstream 581527 28972225 ~ 29043557 (-) True AMCG00011524
AMCG00011522 mRNA downstream 744931 28874133 ~ 28880153 (-) True AMCG00011522
AMCG00011534 mRNA upstream 60798 29686185 ~ 29739369 (-) True AMCG00011534
AMCG00011536 mRNA upstream 262026 29887413 ~ 29920020 (-) False AMCG00011536
AMCG00011535 mRNA upstream 342088 29967475 ~ 29982671 (-) True AMCG00011535
AMCG00011537 mRNA upstream 361672 29987059 ~ 30031892 (-) True AMCG00011537
AMCG00011541 mRNA upstream 429445 30054832 ~ 30058232 (-) True AMCG00011541
TU134083 other downstream 3108577 26506943 ~ 26516507 (-) True AMCG00011485
TU133710 other downstream 4606752 25012205 ~ 25018332 (-) True AMCG00011445
TU133362 other downstream 6564118 23053316 ~ 23060966 (-) True AMCG00011409
TU132729 other downstream 9757182 19865614 ~ 19867902 (-) True AMCG00011356
TU132572 other downstream 10212069 19410368 ~ 19413015 (-) False G105970

Expression Profile