RNA id: AMCG00011573


Basic Information

Item Value
RNA id AMCG00011573
length 1524
RNA type mRNA
GC content 0.66
exon number 2
gene id AMCG00011573
representative True

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 58725 ~ 63831 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGaggctgctcctcctcctcctcctccccctccctcaggACTGTGGGGCGCAGGACAGTGCTTGCCTTCGAGACCGGGACCCGGACCACAAGCCGCGCACCAGCTGTGAGGGGCTGGGCCTGAGCGCGCTGCCCGCCGGCCTCAACCACAGCGACCAGGTGCTGGTTCTGGCCCGCAACCAGATCAATGCCCTGGACTGGACCTGGTACACGGTCTTCCAGGCTCTGTTTGAGCTGGATCTCTCCCACAACCGGGTCTCGACGCTGCGGGGCTGGGGGAAGCCGGGGATGGGGGACGGGGGTGGGCCGAGGGGGCCGGTTCTGGCGACGCTGAGGAAGCTGCACCTGAAAGACAACGAGCTGGACCGGCTGCCCCCGGGCTGCCTCGGCCCCGCGCCGGGCCTCACCGAGCTCTACCTGCAGGGGAACCGCCTCGACACCCTGGACCCCGATCTGTTCGCGGGCCTGGCGGGCCTGGAGGTCCTGGAGCTCTCCCGCAACCGGATCCGCCAGCTGCCCCCGACACTGCTGTCCCGGCTGTCCACCCGCAGCCTCAAGACCTTTGCAGTCCAGGGGAACCAGATCCAGGACATGCCGGACGAGTTCTTCACGGGGCCCGGTGAGATCCCCTACGTCTACCTGTCGCTCAACCCGTGGCGCTGCTCCTGTCGGACCTCATACCTGCGGATCTGGCTGGATGACCAGTCACACAACGTGTACCTGAGGACGGGGGAGACAGATATCGAGGCCAACGTAGAGAGCGTCACCTGCgccacccccccacacctgCAGGGCCGGGCCATCATCGACCTGGACCCGGACATCCTGTGCCCCCCCCAGGGAGACCCCACGGACCTGCCCGACACCACCAGCACCGCTCAATTCACCACAAAGTCACGGAACATGGATTTCTCCACTACAACTTACCCTGCTACCTCTGAGCCTCCTCCCCCTACCACTGAACCCTCTACCGCTCCCACTGAGCCCAGCACCGCTCCCACTGAGCCCAGTACCCCCAGCTCCACTCCCACTGTCCCCAGTACCCCCAGCACCACTCCCACTGTCCCCAGTACCCCCAGCACCACTCCCACTGAGCCCAGTACCAGTACCACTCCCACTGCCCCCAGTACCCCCAGTACCACTCCCACTGAGCCCAGCACCACTCCCACTCGACGCACTCCTCCTGCAGCCCGTCCCCCTTGCACCATCTCAGATCTGGGCCTCAGCCGGGGCGAGAAGGCCGAGGTCATGGGGGCGGGGCACGTGGCTGTCTACTGCTTCTGGATCTTCATCTCCagcctcctcctctgcctcctcctcttcctcagcaCGGTCGGGGAGCTGCTGTGGCTGCGGCGCCTGTtccagtccagcagggtctcagccctggtcctgagagacacagtcctgtccagcagggtctcggccctggtcctgagagacatagtccagtccagcagggtctccagtCCCTCCTCTACCTCTCAATGTCTGAGACCTCCCCCTAGTGCAGGGGAAGTGTGA

Function

GO: NA

KEGG:

id description
K06261 GP1BA, CD42b; platelet glycoprotein Ib alpha chain

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU164340 lncRNA upstream 1062 64893 ~ 65229 (-) True G131149
TU164344 lncRNA upstream 32952 96783 ~ 97829 (-) True G131152
TU164408 lncRNA upstream 106622 170453 ~ 212562 (-) False AMCG00011579
TU164469 lncRNA upstream 296399 360230 ~ 360603 (-) True G131244
TU164759 lncRNA upstream 395679 459510 ~ 755699 (-) True G131425
AMCG00011574 mRNA upstream 1746 65577 ~ 68783 (-) True AMCG00011574
AMCG00011578 mRNA upstream 58528 122359 ~ 138457 (-) True AMCG00011578
AMCG00011577 mRNA upstream 81592 145423 ~ 157396 (-) True AMCG00011577
AMCG00011579 mRNA upstream 102061 165892 ~ 183672 (-) True AMCG00011579
AMCG00011583 mRNA upstream 191050 254881 ~ 260591 (-) True AMCG00011583
TU164448 other upstream 238853 302684 ~ 303915 (-) False AMCG00011589
TU164750 other upstream 350686 414517 ~ 415154 (-) True G131420
TU164816 other upstream 601546 665377 ~ 667310 (-) False G131456
TU164834 other upstream 649317 713148 ~ 720282 (-) False AMCG00011597
TU164850 other upstream 726188 790019 ~ 796419 (-) False AMCG00011601

Expression Profile